BLAST/PSIBLAST alignment of GI: 254780306 and GI: 86357272 at iteration 1
>gi|86357272|ref|YP_469164.1| DNA topoisomerase I [Rhizobium etli CFN 42] Length = 884
>gi|86281374|gb|ABC90437.1| DNA topoisomerase I protein [Rhizobium etli CFN 42] Length = 884
 Score = 1065 bits (2755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/842 (58%), Positives = 646/842 (76%), Gaps = 8/842 (0%)

Query: 1   MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQK 60
           MNV++VESPAKAKTI+KYLGS YKVL+SFGH+RDLPAK GSVLP+++FEM+W +D +S K
Sbjct: 1   MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK 60

Query: 61  HLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVV 120
            +++I  AVKSS  L LATDPDREGEAISWHVLD+L +K ++    ++RV FNAITK+ V
Sbjct: 61  RMKDIAEAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKSVKRVVFNAITKKAV 120

Query: 121 LNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNR 180
           L+AM  PRDI++ LV+AYLARRALDYLVGFNLSP+LW+KLPGARSAGRVQSVALRL+C+R
Sbjct: 121 LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR 180

Query: 181 ENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKA 240
           E++IE F+SEEYW++S LL+TPR D+F A L   +G+R+  ++I N ++A  L + ++ A
Sbjct: 181 ESEIERFISEEYWNISALLKTPRGDEFEARLVSAHGKRLPPRAIGNGEDAGRLKALLEGA 240

Query: 241 TYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGL 300
           +Y V+ +E KPIKRNP P FTTSTLQQ ASS LGFSAS TM+IAQKLYEG+D+ GE VGL
Sbjct: 241 SYIVDTVEAKPIKRNPGPPFTTSTLQQAASSNLGFSASRTMQIAQKLYEGVDIGGETVGL 300

Query: 301 ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF 360
           ITYMRTDGV M+P+A++A RR+I   +G+ YLPEK R YS+K+KNAQEAHEAIRP DF+ 
Sbjct: 301 ITYMRTDGVQMAPEAIDAARRAILDQFGERYLPEKARFYSTKAKNAQEAHEAIRPTDFNR 360

Query: 361 LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC 420
            P ++++FLD+DQ +LY LIWKR +ASQMASA+ ERTT  I A    +   LR  GS++ 
Sbjct: 361 SPDRVRKFLDADQIRLYELIWKRGIASQMASAEIERTTAEITAENKGEKAGLRAVGSVIR 420

Query: 421 FDGFLKVWENQY---DQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLI 477
           FDGF+  + +Q    +Q  + +ED  LP I+A E L   + N++QHFTEPPPRYSE+SLI
Sbjct: 421 FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARETLAKQKINSTQHFTEPPPRYSEASLI 480

Query: 478 KKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFT 537
           KKMEE+GIGRPSTYA  L TL  R YV  +KRK++PQ  GR+VTAFLE+FF++YVEYDFT
Sbjct: 481 KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT 540

Query: 538 ADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKE 597
           ADLEEKLD IS G+LNWK+VL +FW++F  +I+  K+LR++NVLD LN+ L+ ++FP +E
Sbjct: 541 ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE 600

Query: 598 NNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIPE---MKESVL 654
           +  D R C  C T +LSLKL  +YGAFVGC+NYPEC YTRQL+S      E   + E   
Sbjct: 601 DGGDPRICQVCGTGNLSLKL-GRYGAFVGCSNYPECNYTRQLSSENGGEAEGVALNEPKS 659

Query: 655 LGNDLETKESVTLRSGRFGLYVQRGDGKDAKRCSLPKTWKSDSVDYDKAMSLLSLPREIG 714
           LG D  T E +TLRSGRFG Y+QRGDGK+AKR SLPK WK + +DY+KAM+L+SLPR+IG
Sbjct: 660 LGTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKPEDIDYEKAMALISLPRDIG 719

Query: 715 IHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAISCITEK-KKIEKSSRK 773
            HPET K I +G G+YG +L HDG+Y  LE++E V ++ L +A++ I EK  K      +
Sbjct: 720 RHPETGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTLIAEKASKAPGRGAR 779

Query: 774 NSKNQGHVIGTHPEGGSITVHNGRYGPYLHWKKINASLSKEESPDTVDLEKALKILNIKK 833
            +      +G HP+GG+ITV +G+YGPY++W K+NA+L K + P  + +E+AL ++  K 
Sbjct: 780 GTPAALKTLGDHPDGGAITVRDGKYGPYVNWGKVNATLPKGKDPQAITIEEALALITEKA 839

Query: 834 QK 835
            K
Sbjct: 840 GK 841