RPSBLAST alignment for GI: 254780306 and conserved domain: smart00436
>gnl|CDD|128713 smart00436, TOP1Bc, Bacterial DNA topoisomeraes I ATP-binding domain. Extension of TOPRIM in Bacterial DNA topoisomeraes I and III, Eukaryotic DNA topoisomeraes III, reverse gyrase beta subunit. Length = 89
Score = 126 bits (320), Expect = 2e-29
Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 107 IQRVSFNAITKQVVLNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKL-PGARS 165
I+R+ F+ ITK+ + A+K+PR+I+ +LVNA LARR LD L+GFNLS +L +KL G S
Sbjct: 1 IKRIEFSEITKKAIREALKNPREIDENLVNAQLARRILDRLIGFNLSRLLTKKLRKGVLS 60
Query: 166 AGRVQSVALRLICNRENQIESFVSEEYW 193
AGRVQ+ L LI RE +I++FV + YW
Sbjct: 61 AGRVQTPTLGLIVEREREIKNFVPKPYW 88