RPSBLAST alignment for GI: 254780306 and conserved domain: PTZ00407
>gnl|CDD|173597 PTZ00407, PTZ00407, DNA topoisomerase IA; Provisional. Length = 805
Score = 138 bits (348), Expect = 8e-33
Identities = 141/577 (24%), Positives = 239/577 (41%), Gaps = 91/577 (15%)
Query: 47 EFEMIWNIDPSS--QKHLQNIIHA-VKSSTILILATDPDREGEAISWHVLDVLRQKNLIE 103
E+ + W + P Q+ L+ I + T +ILATDPDREGE I+ H L +++
Sbjct: 97 EYTLEWELLPGRRIQETLERYIEEKADNVTEIILATDPDREGELIAVHALQTIKRLYPKL 156
Query: 104 KTKIQRVSFNAITKQVVLNAMK--SPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLP 161
K R ++IT+ + AM+ + DL NA R A+D + GF S ++
Sbjct: 157 KVPFSRAYMHSITEDGIRKAMRERHVEACDYDLANAAETRHAMDRIFGFLGSSVVRAANS 216
Query: 162 GARSAGRVQSVALRLICNRENQIESFVSEEYWSLSV----LLETPRNDKFTAHLTDFNGQ 217
RS GRVQ+ AL LI RE++I++F+ + V +P F+ +T +
Sbjct: 217 QMRSIGRVQTPALILINEREDKIKAFLESNKSTFEVQAMCQFPSPHGTTFSQVVTITPDR 276
Query: 218 RIEKKSISNKKEADDLISFVKKATYSVEKIENKPI----KRNPWPAFTTSTLQQVASSRL 273
+ + + EA + K + + +P P FT +T A+ +L
Sbjct: 277 KGGASHWATEAEARRCLEQWKLNNCTGFSVPLEPKPQPSVVPPPQPFTMATAIAKANRQL 336
Query: 274 GFSASHTMRIAQKLYEGIDVNGEIVGLITYMRTDGVHMSPDALEAVRRSITSHYGDHYL- 332
+S+ Q L++ +G ITY RTD + AL + ++ +G +L
Sbjct: 337 KYSSEMVSGCLQDLFQ--------LGHITYPRTDSTRIDESALPDIYAAVKKEFGKEFLY 388
Query: 333 --------------PEKPRIYSSKSK---------NAQEAHEAIRPNDFDF------LPS 363
+K S + N ++AHEAIRP + D L
Sbjct: 389 RLEDRTVSAQEGKGSKKTGKKRSTKQKKGADTPVGNVEDAHEAIRPTNIDTTGESLSLSP 448
Query: 364 KMKQFLDSDQFQLYNLIWKRSVASQMASAKFER--TTVNIIATYNDQI------GHLRTT 415
+ +Y+L+ + ++A M K E+ TV + +++ +
Sbjct: 449 PTR--------AVYDLVRRNTLAVFMIPMKTEKIVATVKFTSGSGEKLEFELQGKRVVEP 500
Query: 416 GSLLCFDGFLK-----VWENQYDQEKNSEEDILLPYISANE----QLIATETNA--SQHF 464
G F K E D E ++P +S E + ++ + + F
Sbjct: 501 GWTRAFHKGDKGTTGPAEETDEDITAVEEGAPVVPSLSQEEFKAIMNLRSQLGSGVQKGF 560
Query: 465 TE------------PPPRYSESSLIKKMEEIGIGRPSTYATILETLYKRKYV-IAEKRKI 511
E PP +SE +LI++++ G+GRPSTY I++TL R Y+ + K +
Sbjct: 561 FELRSPQVRENRPVPPLPHSEGTLIEELKNNGVGRPSTYPMIVKTLLARGYIAVNPKGRC 620
Query: 512 LPQNTGRIVTAFLENFFSQYVEYDFTADLEEKLDEIS 548
GR++ ++ F V+ FTA E+KLD I+
Sbjct: 621 ETTPVGRMLVETAKSTFPSIVDIGFTAAFEKKLDRIA 657