RPSBLAST alignment for GI: 254780306 and conserved domain: PRK05582

>gnl|CDD|180146 PRK05582, PRK05582, DNA topoisomerase I; Validated. Length = 650
 Score =  743 bits (1922), Expect = 0.0
 Identities = 278/639 (43%), Positives = 396/639 (61%), Gaps = 37/639 (5%)

Query: 2   NVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKH 61
            ++IVESPAKAKTI KYLG NYKV++S GHIRDLP  +  +  E  FE  +         
Sbjct: 4   KLVIVESPAKAKTIEKYLGKNYKVVASMGHIRDLPKSQLGIDIENNFEPKYITIRGKGPV 63

Query: 62  LQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVL 121
           ++ +  A K +  + LATDPDREGEAI+WH+  +L     +++ +  R+ FN ITK  + 
Sbjct: 64  IKELKKAAKKAKKVYLATDPDREGEAIAWHLAHILG----LDEKEKNRIVFNEITKDAIK 119

Query: 122 NAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNRE 181
           NA K+PR I+++LV+A  ARR LD LVG+ LSP+LW+K+    SAGRVQSVAL+LI +RE
Sbjct: 120 NAFKNPRKIDMNLVDAQQARRILDRLVGYKLSPLLWKKVKKGLSAGRVQSVALKLIIDRE 179

Query: 182 NQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKAT 241
            +I +FV EEYW++    +     KF A    + G   +K  + N+++  ++++ +KK  
Sbjct: 180 KEIRAFVPEEYWTIDAEFK-KGKKKFEASFYGYKG---KKIELKNEEDVKEILAELKKKD 235

Query: 242 YSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGE-IVGL 300
           + V K++ K  KRNP P FTTSTLQQ A+ +L FS   TM IAQ+LYEGID+  +  VGL
Sbjct: 236 FKVSKVKKKERKRNPPPPFTTSTLQQEAARKLNFSTKKTMMIAQQLYEGIDLGKQGTVGL 295

Query: 301 ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF 360
           ITYMRTD   +S  A E  R  I   YG  YLP+KP++Y  K   AQ+AHEAIRP     
Sbjct: 296 ITYMRTDSTRISDTAQEEAREFIEEKYGKEYLPKKPKVYKKK-SGAQDAHEAIRPTSVFL 354

Query: 361 LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC 420
            P   K++L  DQ +LY LIW R VASQMA A F+  +V++    N      R +GS + 
Sbjct: 355 TPESAKKYLTKDQLKLYKLIWNRFVASQMAPAVFDTVSVDLEN--NGVK--FRASGSKVK 410

Query: 421 FDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLIKKM 480
           FDGF+KV+        + E+D +LP +   E++   +    QHFT+PP RY+E+SLIK +
Sbjct: 411 FDGFMKVYV------GDEEKDKMLPELEEGEKVKLKKIEPEQHFTQPPARYTEASLIKTL 464

Query: 481 EEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFTADL 540
           EE+GIGRPSTYA  + T+ KR YV  EK++++P   G IV   LE FF   V+ +FTA++
Sbjct: 465 EELGIGRPSTYAPTISTIQKRGYVKLEKKRLVPTELGEIVNELLEEFFPDIVDVEFTAEM 524

Query: 541 EEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKENNE 600
           EEKLDEI  GK +WK+VL +F++ F ++I+  +K             +  +    +   E
Sbjct: 525 EEKLDEIEEGKEDWKKVLDDFYKPFEKEIEKAEK------------EIEKIKIKDEPAGE 572

Query: 601 DSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQL 639
           D   CP+C    + +K+  +YG F+ C+N+P+C+ T+ +
Sbjct: 573 D---CPKCG-SPMVIKM-GRYGKFIACSNFPDCRNTKPI 606