RPSBLAST alignment for GI: 254780306 and conserved domain: PRK06319

>gnl|CDD|180527 PRK06319, PRK06319, DNA topoisomerase I/SWI domain fusion protein; Validated. Length = 860
 Score =  587 bits (1514), Expect = e-168
 Identities = 302/696 (43%), Positives = 428/696 (61%), Gaps = 56/696 (8%)

Query: 3   VIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKHL 62
           +IIVESPAK KT+ K LG  +   SS GHI DLPAK+  +  E +FE  + I P  ++ +
Sbjct: 5   LIIVESPAKIKTLQKLLGEGFIFASSLGHIVDLPAKEFGIDIENDFEPDYQILPDKEEVI 64

Query: 63  QNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVLN 122
             I    K   ++ L+ DPDREGEAI+WH+ + L  KN    TKIQR+SFNAITK  V  
Sbjct: 65  NKICKLAKKCDVVYLSPDPDREGEAIAWHIANQL-PKN----TKIQRISFNAITKGAVTE 119

Query: 123 AMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLP--GARSAGRVQSVALRLICNR 180
           A+K PR+I++ LVNA  ARR LD +VG+ +SPIL +KL      SAGRVQSVAL+L+ +R
Sbjct: 120 ALKHPREIDMALVNAQQARRLLDRIVGYKISPILSRKLQRRSGVSAGRVQSVALKLVVDR 179

Query: 181 ENQIESFVSEEYWSLSVLLETPRNDK-FTAHLTDFNGQRIEKKS-----------ISNKK 228
           E  IE+FV  EYW++ V L+ P+  K F AHL   +G++ EK+            I++K+
Sbjct: 180 EKAIEAFVPVEYWNIRVHLKDPKTQKTFWAHLYSVDGKKWEKEIPEGKTEDEVLLINSKE 239

Query: 229 EADDLISFVKKATYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLY 288
           +AD ++  ++ ATY+V ++E+K  +RN +P F TSTLQQ AS    FS+S TM IAQ LY
Sbjct: 240 KADHIVELLESATYTVTRVESKEKRRNAYPPFITSTLQQEASRHFRFSSSRTMNIAQTLY 299

Query: 289 EGIDVNGE-IVGLITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQ 347
           EG+D++ E   GLITYMRTD V   P+AL+ VR+ I   +G  +LP  P +Y++K K AQ
Sbjct: 300 EGVDLDSEGATGLITYMRTDSVRTDPEALKQVRKYIEGTFGKEFLPSSPNVYTTK-KMAQ 358

Query: 348 EAHEAIRPNDFDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYND 407
           +AHEAIRP D    P K++  L  DQ++LY+LIWKR VASQM  A ++  T+ I  T N 
Sbjct: 359 DAHEAIRPTDITLTPEKLRSKLTEDQYKLYSLIWKRFVASQMIPAIYD--TLAIRITTNK 416

Query: 408 QIGHLRTTGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEP 467
            I  LR TGSLL F GFL V+E + D E + EE+I LP +   + L   E +A Q FT+P
Sbjct: 417 GI-DLRATGSLLKFKGFLAVYEEKRDDEGDEEENIHLPKLHEQDVLTKEELSAEQAFTKP 475

Query: 468 PPRYSESSLIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENF 527
            PR++E+SL+K++E+ GIGRPSTYATI+  +  R+Y + E +++ P   G+I++ FLE  
Sbjct: 476 LPRFTEASLVKELEKSGIGRPSTYATIMNKIQSREYTLKENQRLRPTELGKIISQFLETN 535

Query: 528 FSQYVEYDFTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDT 587
           F + ++  FTA +E++L+ I+  K  WK +L EFWE F+  + + +K     +  I+ + 
Sbjct: 536 FPRIMDIGFTALMEDELELIADNKKPWKLLLQEFWELFLPVVVTAEKEAF--IPRIVTEI 593

Query: 588 LSSVIFPPKENNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYT---RQLTSNPQ 644
                            CP+CH   L +K+ +K   F GC+ YPEC Y     +LT N +
Sbjct: 594 ----------------DCPKCHKGKL-VKIWAKNRYFYGCSEYPECDYKTSEEELTFNKE 636

Query: 645 D----IPEMKESVLLGNDLETKESVTLRSGRFGLYV 676
           D     P      L G +++      +R GRFG ++
Sbjct: 637 DYAEDTPWDSPCPLCGGEMK------VRHGRFGTFL 666