RPSBLAST alignment for GI: 254780306 and conserved domain: PRK06319
>gnl|CDD|180527 PRK06319, PRK06319, DNA topoisomerase I/SWI domain fusion protein; Validated. Length = 860
Score = 587 bits (1514), Expect = e-168
Identities = 302/696 (43%), Positives = 428/696 (61%), Gaps = 56/696 (8%)
Query: 3 VIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKHL 62
+IIVESPAK KT+ K LG + SS GHI DLPAK+ + E +FE + I P ++ +
Sbjct: 5 LIIVESPAKIKTLQKLLGEGFIFASSLGHIVDLPAKEFGIDIENDFEPDYQILPDKEEVI 64
Query: 63 QNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVLN 122
I K ++ L+ DPDREGEAI+WH+ + L KN TKIQR+SFNAITK V
Sbjct: 65 NKICKLAKKCDVVYLSPDPDREGEAIAWHIANQL-PKN----TKIQRISFNAITKGAVTE 119
Query: 123 AMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLP--GARSAGRVQSVALRLICNR 180
A+K PR+I++ LVNA ARR LD +VG+ +SPIL +KL SAGRVQSVAL+L+ +R
Sbjct: 120 ALKHPREIDMALVNAQQARRLLDRIVGYKISPILSRKLQRRSGVSAGRVQSVALKLVVDR 179
Query: 181 ENQIESFVSEEYWSLSVLLETPRNDK-FTAHLTDFNGQRIEKKS-----------ISNKK 228
E IE+FV EYW++ V L+ P+ K F AHL +G++ EK+ I++K+
Sbjct: 180 EKAIEAFVPVEYWNIRVHLKDPKTQKTFWAHLYSVDGKKWEKEIPEGKTEDEVLLINSKE 239
Query: 229 EADDLISFVKKATYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLY 288
+AD ++ ++ ATY+V ++E+K +RN +P F TSTLQQ AS FS+S TM IAQ LY
Sbjct: 240 KADHIVELLESATYTVTRVESKEKRRNAYPPFITSTLQQEASRHFRFSSSRTMNIAQTLY 299
Query: 289 EGIDVNGE-IVGLITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQ 347
EG+D++ E GLITYMRTD V P+AL+ VR+ I +G +LP P +Y++K K AQ
Sbjct: 300 EGVDLDSEGATGLITYMRTDSVRTDPEALKQVRKYIEGTFGKEFLPSSPNVYTTK-KMAQ 358
Query: 348 EAHEAIRPNDFDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYND 407
+AHEAIRP D P K++ L DQ++LY+LIWKR VASQM A ++ T+ I T N
Sbjct: 359 DAHEAIRPTDITLTPEKLRSKLTEDQYKLYSLIWKRFVASQMIPAIYD--TLAIRITTNK 416
Query: 408 QIGHLRTTGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEP 467
I LR TGSLL F GFL V+E + D E + EE+I LP + + L E +A Q FT+P
Sbjct: 417 GI-DLRATGSLLKFKGFLAVYEEKRDDEGDEEENIHLPKLHEQDVLTKEELSAEQAFTKP 475
Query: 468 PPRYSESSLIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENF 527
PR++E+SL+K++E+ GIGRPSTYATI+ + R+Y + E +++ P G+I++ FLE
Sbjct: 476 LPRFTEASLVKELEKSGIGRPSTYATIMNKIQSREYTLKENQRLRPTELGKIISQFLETN 535
Query: 528 FSQYVEYDFTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDT 587
F + ++ FTA +E++L+ I+ K WK +L EFWE F+ + + +K + I+ +
Sbjct: 536 FPRIMDIGFTALMEDELELIADNKKPWKLLLQEFWELFLPVVVTAEKEAF--IPRIVTEI 593
Query: 588 LSSVIFPPKENNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYT---RQLTSNPQ 644
CP+CH L +K+ +K F GC+ YPEC Y +LT N +
Sbjct: 594 ----------------DCPKCHKGKL-VKIWAKNRYFYGCSEYPECDYKTSEEELTFNKE 636
Query: 645 D----IPEMKESVLLGNDLETKESVTLRSGRFGLYV 676
D P L G +++ +R GRFG ++
Sbjct: 637 DYAEDTPWDSPCPLCGGEMK------VRHGRFGTFL 666