RPSBLAST alignment for GI: 254780306 and conserved domain: PRK06599
>gnl|CDD|180637 PRK06599, PRK06599, DNA topoisomerase I; Validated. Length = 675
Score = 947 bits (2450), Expect = 0.0
Identities = 344/692 (49%), Positives = 460/692 (66%), Gaps = 20/692 (2%)
Query: 1 MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQK 60
++IVESPAKAKTI KYLG +YKVL+SFGH+RDLP KKG V P+ +F + I +K
Sbjct: 3 KKLVIVESPAKAKTIKKYLGKDYKVLASFGHVRDLPKKKGGVDPDNDFAPKYEIIEGKEK 62
Query: 61 HLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVV 120
+ + A K + + LATDPDREGEAI+WH+ +VL++ L +K ++RV FN ITK+ V
Sbjct: 63 VVDALKKAAKKADAVYLATDPDREGEAIAWHIAEVLKEAKLKDK-NVKRVVFNEITKKAV 121
Query: 121 LNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNR 180
A+++PRDI++DLV+A ARRALDYLVGF LSP+LW+K+ SAGRVQSVALRLIC R
Sbjct: 122 QEAIENPRDIDMDLVDAQQARRALDYLVGFKLSPLLWKKVRRGLSAGRVQSVALRLICER 181
Query: 181 ENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKA 240
E++IE+F+ +EYW++ L T + FTA L + NG+++EK SI+N+++A L+ ++
Sbjct: 182 EDEIEAFIPQEYWTIEADLATSNGEPFTAKLVEVNGKKLEKFSITNEEQAKALVKALEGQ 241
Query: 241 TYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGL 300
Y+V+KIE K KRNP P F TSTLQQ AS +LGFSA TMRIAQKLYEGID+ VGL
Sbjct: 242 AYTVDKIEKKERKRNPPPPFITSTLQQEASRKLGFSAKKTMRIAQKLYEGIDLGEGTVGL 301
Query: 301 ITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPNDFDF 360
ITYMRTD V +S +AL+ R+ IT YG YLP KPR+Y KSKNAQEAHEAIRP +
Sbjct: 302 ITYMRTDSVRLSNEALDEARKYITKKYGKEYLPAKPRVYKKKSKNAQEAHEAIRPTSINR 361
Query: 361 LPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLC 420
P +K +L DQF+LY LIWKR+VASQMA A ++T+V+I + + R TGS++
Sbjct: 362 TPESLKPYLTPDQFKLYELIWKRTVASQMAPAILDQTSVDIASENGKYV--FRATGSVIL 419
Query: 421 FDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLIKKM 480
F GFLKV+ D E+ +E LLP + E+L E QHFTEPPPRYSE+SL+KK+
Sbjct: 420 FPGFLKVYGESKDDEEEDDEK-LLPPLKEGEKLKLDELLPEQHFTEPPPRYSEASLVKKL 478
Query: 481 EEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYDFTADL 540
EE GIGRPSTYA+I+ TL R+YV EK++ +P + GRIV FL F +YV+YDFTA L
Sbjct: 479 EEYGIGRPSTYASIISTLQDREYVELEKKRFIPTDLGRIVNDFLVEHFPKYVDYDFTAGL 538
Query: 541 EEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDTLSSVIFPPKENNE 600
E++LDEI+ GK +WK VL EFWE FI ++ +++ + + E
Sbjct: 539 EDELDEIAEGKKDWKPVLREFWEPFISNLEKVEEDVRTEKV---------------TQEE 583
Query: 601 DSRTCPECHTHSLSLKLSSKYGAFVGCTNYPECKYTRQLTSNPQDIPEMKESVLLGNDLE 660
TCP+C L LKL K G F+GC+ YPECKYT+ +T + + E +E V +
Sbjct: 584 TDETCPKCGGGPLVLKL-GKNGKFLGCSGYPECKYTKNITRDEDEPIEEEEIVEEEKCPK 642
Query: 661 TKESVTLRSGRFGLYVQRGDGKDAKRCSLPKT 692
+ L+ GR+G ++ + K +
Sbjct: 643 CGGPLVLKKGRYGKFLACSGYPECKHIKPLEK 674