RPSBLAST alignment for GI: 254780306 and conserved domain: PRK07561
>gnl|CDD|181030 PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated. Length = 859
Score = 1137 bits (2944), Expect = 0.0
Identities = 374/857 (43%), Positives = 518/857 (60%), Gaps = 58/857 (6%)
Query: 1 MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGS--------------VLPEK 46
+++IVESPAKAKTI+KYLGS+Y V +S GHIRDLP S V P+
Sbjct: 2 KSLVIVESPAKAKTINKYLGSDYVVKASVGHIRDLPTSASSVPAKEKGALWARMGVDPDH 61
Query: 47 EFEMIWNIDPSSQKHLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTK 106
+FE ++ + P +K + + A K + L LATDPDREGEAI+WH+L+VL
Sbjct: 62 DFEALYEVLPGKEKVVSELKKAAKDADELYLATDPDREGEAIAWHLLEVLGGD----DVP 117
Query: 107 IQRVSFNAITKQVVLNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSA 166
++RV FN ITK + A ++PR+++++LVNA ARR LD LVG+ +SP+LW+K+ SA
Sbjct: 118 VKRVVFNEITKNAIQEAFENPRELDINLVNAQQARRFLDRLVGYMVSPLLWKKIARGLSA 177
Query: 167 GRVQSVALRLICNRENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISN 226
GRVQSVA+RLI RE +IE+FV EEYW + L TPR D F A LT +G++ + N
Sbjct: 178 GRVQSVAVRLIVEREREIEAFVPEEYWDIHADLTTPRGDAFEARLTHLDGKKFAPVDLLN 237
Query: 227 KKEADDLISFVKKATYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQK 286
+ +A+ ++ ++ A YSV +E+KP R P FTTSTLQQ AS +LGFS TMRIAQ+
Sbjct: 238 EAQAEAAVAALEGARYSVASVEDKPTTRKPSAPFTTSTLQQEASRKLGFSVKKTMRIAQR 297
Query: 287 LYEGIDVNGEIVGLITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNA 346
LYE G ITYMRTD ++S +A+ A R I +YG YLPEKPR YSSK+KNA
Sbjct: 298 LYE--------AGYITYMRTDSTNLSQEAINAARGYIGDNYGKKYLPEKPRQYSSKAKNA 349
Query: 347 QEAHEAIRPNDFDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYN 406
QEAHEAIRP+D P ++K L+ D +LY LIWKR VASQMA A+++ TTV I A
Sbjct: 350 QEAHEAIRPSDVFRTPDQLK-GLEGDAQRLYELIWKRFVASQMAPARYDSTTVTIAAGDA 408
Query: 407 DQIGHLRTTGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTE 466
+ LR TG +L FDGFLKV+ D + +ED LP + + L + + +QHFT+
Sbjct: 409 E----LRATGRVLRFDGFLKVYVEGRDDALD-DEDRRLPALKVGDALTLEKLDPTQHFTK 463
Query: 467 PPPRYSESSLIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLEN 526
PP RYSE+SL+K++E++GIGRPSTYA+I+ T+ R YV E R+ P+ GRIVT LE
Sbjct: 464 PPARYSEASLVKELEKLGIGRPSTYASIISTIQDRGYVRLENRRFYPEKMGRIVTDRLEE 523
Query: 527 FFSQYVEYDFTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILND 586
FF + V+YDFTA +EE+LD+I+ G+ +WK VL +F+++F ++++ ++LR +
Sbjct: 524 FFPRLVDYDFTARMEEELDDIANGEADWKPVLDDFYKDFSQQLEKAEELREEGGMR---- 579
Query: 587 TLSSVIFPPKENNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNY---PECKYTRQLTSNP 643
P + R CP C + ++ K G F+GC+ Y CK TR LT
Sbjct: 580 --------PNQMVITDRDCPTCGR-GMGIRT-GKTGVFLGCSGYALKERCKTTRNLTPEE 629
Query: 644 QDIP----EMKESVLLGNDLETKESVTLRSGRFGLYVQRGDGKDAKRCSLPKTWKSDSVD 699
+ + E E+ LG D E ++ LRSGRFG YVQ G+G +R SLPK + V
Sbjct: 630 ETLNVLEGEDAETRALGADPECGTAMVLRSGRFGPYVQEGEGDKPRRLSLPKGNNPECVG 689
Query: 700 YDKAMSLLSLPREIGIHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAIS 759
+ A+ LLSLPR +G HPE I A G++G Y+ G Y L++ +VLTI L +A+
Sbjct: 690 LEIALGLLSLPRPVGEHPECGSEIQAKIGRFGPYVKCGGTYASLKNTRKVLTIGLNRAVE 749
Query: 760 CITEKKKIEKSSRKNSKNQGHVIGTHPEGGSITVHNGRYGPYLHWKKINASLSKEESPDT 819
+ E K+ K +G G + +GRYGPY+ K NA+L K
Sbjct: 750 LLAEPKR-----PKEDPVPLPELGCPKSGAPFVLRDGRYGPYVKHGKANATLPKGRETRA 804
Query: 820 VDLEKALKILNIKKQKK 836
+E+AL++L K +K
Sbjct: 805 PTVEEALELLAEKPEKL 821