RPSBLAST alignment for GI: 254780306 and conserved domain: PRK07561

>gnl|CDD|181030 PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated. Length = 859
 Score = 1137 bits (2944), Expect = 0.0
 Identities = 374/857 (43%), Positives = 518/857 (60%), Gaps = 58/857 (6%)

Query: 1   MNVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGS--------------VLPEK 46
            +++IVESPAKAKTI+KYLGS+Y V +S GHIRDLP    S              V P+ 
Sbjct: 2   KSLVIVESPAKAKTINKYLGSDYVVKASVGHIRDLPTSASSVPAKEKGALWARMGVDPDH 61

Query: 47  EFEMIWNIDPSSQKHLQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTK 106
           +FE ++ + P  +K +  +  A K +  L LATDPDREGEAI+WH+L+VL          
Sbjct: 62  DFEALYEVLPGKEKVVSELKKAAKDADELYLATDPDREGEAIAWHLLEVLGGD----DVP 117

Query: 107 IQRVSFNAITKQVVLNAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSA 166
           ++RV FN ITK  +  A ++PR+++++LVNA  ARR LD LVG+ +SP+LW+K+    SA
Sbjct: 118 VKRVVFNEITKNAIQEAFENPRELDINLVNAQQARRFLDRLVGYMVSPLLWKKIARGLSA 177

Query: 167 GRVQSVALRLICNRENQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISN 226
           GRVQSVA+RLI  RE +IE+FV EEYW +   L TPR D F A LT  +G++     + N
Sbjct: 178 GRVQSVAVRLIVEREREIEAFVPEEYWDIHADLTTPRGDAFEARLTHLDGKKFAPVDLLN 237

Query: 227 KKEADDLISFVKKATYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQK 286
           + +A+  ++ ++ A YSV  +E+KP  R P   FTTSTLQQ AS +LGFS   TMRIAQ+
Sbjct: 238 EAQAEAAVAALEGARYSVASVEDKPTTRKPSAPFTTSTLQQEASRKLGFSVKKTMRIAQR 297

Query: 287 LYEGIDVNGEIVGLITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNA 346
           LYE         G ITYMRTD  ++S +A+ A R  I  +YG  YLPEKPR YSSK+KNA
Sbjct: 298 LYE--------AGYITYMRTDSTNLSQEAINAARGYIGDNYGKKYLPEKPRQYSSKAKNA 349

Query: 347 QEAHEAIRPNDFDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYN 406
           QEAHEAIRP+D    P ++K  L+ D  +LY LIWKR VASQMA A+++ TTV I A   
Sbjct: 350 QEAHEAIRPSDVFRTPDQLK-GLEGDAQRLYELIWKRFVASQMAPARYDSTTVTIAAGDA 408

Query: 407 DQIGHLRTTGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTE 466
           +    LR TG +L FDGFLKV+    D   + +ED  LP +   + L   + + +QHFT+
Sbjct: 409 E----LRATGRVLRFDGFLKVYVEGRDDALD-DEDRRLPALKVGDALTLEKLDPTQHFTK 463

Query: 467 PPPRYSESSLIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLEN 526
           PP RYSE+SL+K++E++GIGRPSTYA+I+ T+  R YV  E R+  P+  GRIVT  LE 
Sbjct: 464 PPARYSEASLVKELEKLGIGRPSTYASIISTIQDRGYVRLENRRFYPEKMGRIVTDRLEE 523

Query: 527 FFSQYVEYDFTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILND 586
           FF + V+YDFTA +EE+LD+I+ G+ +WK VL +F+++F ++++  ++LR    +     
Sbjct: 524 FFPRLVDYDFTARMEEELDDIANGEADWKPVLDDFYKDFSQQLEKAEELREEGGMR---- 579

Query: 587 TLSSVIFPPKENNEDSRTCPECHTHSLSLKLSSKYGAFVGCTNY---PECKYTRQLTSNP 643
                   P +     R CP C    + ++   K G F+GC+ Y     CK TR LT   
Sbjct: 580 --------PNQMVITDRDCPTCGR-GMGIRT-GKTGVFLGCSGYALKERCKTTRNLTPEE 629

Query: 644 QDIP----EMKESVLLGNDLETKESVTLRSGRFGLYVQRGDGKDAKRCSLPKTWKSDSVD 699
           + +     E  E+  LG D E   ++ LRSGRFG YVQ G+G   +R SLPK    + V 
Sbjct: 630 ETLNVLEGEDAETRALGADPECGTAMVLRSGRFGPYVQEGEGDKPRRLSLPKGNNPECVG 689

Query: 700 YDKAMSLLSLPREIGIHPETQKNIIAGTGKYGYYLNHDGAYTKLESIEQVLTIDLEQAIS 759
            + A+ LLSLPR +G HPE    I A  G++G Y+   G Y  L++  +VLTI L +A+ 
Sbjct: 690 LEIALGLLSLPRPVGEHPECGSEIQAKIGRFGPYVKCGGTYASLKNTRKVLTIGLNRAVE 749

Query: 760 CITEKKKIEKSSRKNSKNQGHVIGTHPEGGSITVHNGRYGPYLHWKKINASLSKEESPDT 819
            + E K+      K        +G    G    + +GRYGPY+   K NA+L K      
Sbjct: 750 LLAEPKR-----PKEDPVPLPELGCPKSGAPFVLRDGRYGPYVKHGKANATLPKGRETRA 804

Query: 820 VDLEKALKILNIKKQKK 836
             +E+AL++L  K +K 
Sbjct: 805 PTVEEALELLAEKPEKL 821