RPSBLAST alignment for GI: 254780306 and conserved domain: PRK08173

>gnl|CDD|181267 PRK08173, PRK08173, DNA topoisomerase III; Validated. Length = 862
 Score =  150 bits (381), Expect = 1e-36
 Identities = 162/643 (25%), Positives = 270/643 (41%), Gaps = 138/643 (21%)

Query: 4   IIVESPAKAKTISKYLG----------SNYKVLSS-FGHIRDLPA------KKGS----- 41
           II E P+ A  I++ LG          S+  VLSS  GH+ ++ A      K+G      
Sbjct: 6   IIAEKPSVANDIARALGGFTKHDEYFESDEYVLSSAVGHLLEIAAPEEYEVKRGKWSFAH 65

Query: 42  --VLPEKEFEMIWNIDPSSQKHLQNIIHAVKSS--TILILATDPDREGEAISWHVLDVLR 97
             V+P   F++  N    ++  L+ +   +K    T LI A D  REGE I   +     
Sbjct: 66  LPVIPPH-FDL--NPIAKTESRLKVLTKLIKRKDVTRLINACDAGREGELIFRLIA---- 118

Query: 98  QKNLIEKTKIQRVSFNAITKQVVLNAMKSPRDIN--LDLVNAYLARRALDYLVGFNLSPI 155
            ++   K  ++R+   ++T Q + +   + R       L +A   R   D+LVG N    
Sbjct: 119 -QHAKAKKPVKRLWLQSMTPQAIRDGFANLRSDEDMQPLADAARCRSEADWLVGIN---- 173

Query: 156 LWQKLPGARS---------------AGRVQSVALRLICNRENQIESFVSEEYWSLSVLLE 200
                 G R+                GRVQ+  L ++  RE +I  FV  +YW +     
Sbjct: 174 ------GTRAMTAFNSKGGGFFLTTVGRVQTPTLSIVVEREEKIRRFVPRDYWEVRAEFV 227

Query: 201 TPR--------NDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKATYSVEKIENKPI 252
                      + KF     +F+ ++   + + ++  A+ +++  +    +V + E+KP 
Sbjct: 228 AAAGFYEGRWFDPKFKK--DEFDPEKRASR-LWSEAAAEAIVAACRGKPGTVTE-ESKPS 283

Query: 253 KRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGLITYMRTDGVHMS 312
            +     F  ++LQ+ A+ R GFSA +T+ +AQ LYE   V       +TY RTD   + 
Sbjct: 284 TQLSPLLFDLTSLQREANGRFGFSAKNTLGLAQALYEKHKV-------LTYPRTDSRALP 336

Query: 313 PDALEAVRRSITSHYGD-HYLPEKPRIYSSKSKNAQEAHEAIRPNDFDFLPSKMKQFLDS 371
            D L  V++++       +YLP   +I              ++PN   F  SK+     S
Sbjct: 337 EDYLGTVKQTLEMLKESNNYLPHAKQILDKG---------WVKPNKRIFDNSKI-----S 382

Query: 372 DQF-----------------QLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRT 414
           D F                 +LY+L+ KR +A    +A+F  TT   I        H +T
Sbjct: 383 DHFAIIPTLQAPKSLSEPEQKLYDLVVKRFLAVFFPAAEFLVTTR--ITEVAGH--HFKT 438

Query: 415 TGSLLCFDGFLKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSES 474
            G +L   G+L V    Y +E    +  L+P +   E++   +  A    T+PP RY+E+
Sbjct: 439 EGKVLVNPGWLAV----YGKEAQGADANLVP-VQKGEKVKTDKIEAVALTTKPPARYNEA 493

Query: 475 SLIKKME----------------EIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGR 518
           +L+  ME                E G+G P+T A I+E L   KY++ E R+++P     
Sbjct: 494 TLLSAMEGAGKLVEDDELREAMAEKGLGTPATRAAIIEGLLGEKYLVREGRELIPTAKAF 553

Query: 519 IVTAFLENF-FSQYVEYDFTADLEEKLDEISTGKLNWKEVLHE 560
            +   L      +    + T + E KL +I  GKL+    + E
Sbjct: 554 QLMTLLRGLGVEELTSPELTGEWEYKLSQIERGKLSRDAFMQE 596