RPSBLAST alignment for GI: 254780306 and conserved domain: PRK08780
>gnl|CDD|181555 PRK08780, PRK08780, DNA topoisomerase I; Provisional. Length = 780
Score = 665 bits (1718), Expect = 0.0
Identities = 280/575 (48%), Positives = 383/575 (66%), Gaps = 10/575 (1%)
Query: 2 NVIIVESPAKAKTISKYLGSNYKVLSSFGHIRDLPAKKGSVLPEKEFEMIWNIDPSSQKH 61
+++IVESPAKAKTI+KYLG ++ VL+S+GH+RDL K+G+V PE F M +++ ++KH
Sbjct: 4 HLVIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPENGFAMRYDLIDKNEKH 63
Query: 62 LQNIIHAVKSSTILILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVL 121
++ I A KS+ L LATDPDREGEAISWH+ ++L+++ L++ +QRV F IT + +
Sbjct: 64 VEAIAKAAKSADDLYLATDPDREGEAISWHLAEILKERGLLKDKPMQRVVFTEITPRAIK 123
Query: 122 NAMKSPRDINLDLVNAYLARRALDYLVGFNLSPILWQKLPGARSAGRVQSVALRLICNRE 181
AM PRDI DLV+A ARRALDYLVGFNLSP+LW+K+ SAGRVQS ALR+I RE
Sbjct: 124 EAMAKPRDIASDLVDAQQARRALDYLVGFNLSPLLWRKIQRGLSAGRVQSPALRMIVERE 183
Query: 182 NQIESFVSEEYWSLSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKA- 240
+IE+F++ EYWS+ P F A L +GQ+ E+ +I++ A+ +++A
Sbjct: 184 EEIEAFIAREYWSIEADCAHPSQ-PFNAKLIKLDGQKFEQFTITDGDTAEAARLRIQQAA 242
Query: 241 --TYSVEKIENKPIKRNPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGE-I 297
T V +E+K KRNP P FTTSTLQQ AS +LGF+ TM++AQKLYEG+D+ E
Sbjct: 243 QGTLHVTDVESKERKRNPAPPFTTSTLQQEASRKLGFTTRRTMQVAQKLYEGVDLGDEGS 302
Query: 298 VGLITYMRTDGVHMSPDALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRPND 357
VGLITYMRTD V++S DAL +R I YG LP++P Y +KSKNAQEAHEA+RP
Sbjct: 303 VGLITYMRTDSVNLSQDALAEIRDVIARDYGTASLPDQPNTYKTKSKNAQEAHEAVRPTS 362
Query: 358 FDFLPSKMKQFLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGS 417
P+++ +FL DQ +LY LIWKR+VA QM A +V+ +A ++ + R TGS
Sbjct: 363 ALRTPAQVARFLSDDQRRLYELIWKRAVACQMIPATLNTVSVD-LAAGSEHV--FRATGS 419
Query: 418 LLCFDGFLKVWENQYDQEKNSEEDI--LLPYISANEQLIATETNASQHFTEPPPRYSESS 475
+ GFL V+E D + +ED LP + + + A QHFTEPPPRY+E+S
Sbjct: 420 TVVVPGFLAVYEEGKDDKSAEDEDEGRKLPPMKEGDNVPLERIRAEQHFTEPPPRYTEAS 479
Query: 476 LIKKMEEIGIGRPSTYATILETLYKRKYVIAEKRKILPQNTGRIVTAFLENFFSQYVEYD 535
L+K +EE GIGRPSTYA+I+ TL RKYV E R+ P + GR V FL F++YV+YD
Sbjct: 480 LVKALEEYGIGRPSTYASIISTLQFRKYVEMEGRRFRPTDVGRAVNKFLTGHFTRYVDYD 539
Query: 536 FTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKID 570
FTA LE+ LD +S G+ W ++ +FW F E ++
Sbjct: 540 FTARLEDDLDAVSRGEKEWIPLMEKFWGPFKELVE 574