RPSBLAST alignment for GI: 254780306 and conserved domain: COG1110

>gnl|CDD|31307 COG1110, COG1110, Reverse gyrase [DNA replication, recombination, and repair]. Length = 1187
 Score =  285 bits (730), Expect = 4e-77
 Identities = 182/623 (29%), Positives = 282/623 (45%), Gaps = 121/623 (19%)

Query: 4    IIVESPAKAKTISKYLGSNYK-------------------VLSSFGHIRDLPAKKG--SV 42
            +IVESP KA+TI+ + G                       + +S GH+ DL  + G   V
Sbjct: 621  MIVESPNKARTIASFFGRPSVRRLGGGVVYEVAIGDLVLTITASGGHVFDLVTEPGVHGV 680

Query: 43   LPEKE-----FEMIWNIDPSSQKHL-----------------QNIIHAVKS-----STIL 75
            L +       ++ I       ++ +                    + A++        IL
Sbjct: 681  LVKDGKYVPVYDTIKRCRDCGEQFVDSEDKCPRCGSRNVEDKTETVEALRELALEVDEIL 740

Query: 76   ILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVLNAMKSPRDINLDLV 135
            I  TDPD EGE I+W V + LR  N      ++R+ F+ +T++ +L A+K+PRD++ +LV
Sbjct: 741  I-GTDPDTEGEKIAWDVFNYLRPYN----PNVKRIEFHEVTRRAILEALKNPRDVDENLV 795

Query: 136  NAYLARRALDYLVGFNLSPILWQKLPGAR-SAGRVQSVALRLICNRENQIESFVSEEYWS 194
             A + RR  D  +GF LS  LW        SAGRVQ+  L  I NR         EEY  
Sbjct: 796  KAQIVRRIEDRWIGFELSQKLWDVFNNKNLSAGRVQTPVLGWIVNRY--------EEY-- 845

Query: 195  LSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKATYSVEKIENKPIKR 254
                       +   +L       +      N++E +++   +K     V  +  +  ++
Sbjct: 846  ----------KEKRGYLVIQLDLDLP---SGNREEVENVKRKLKLIVVEVVDVVEREEEK 892

Query: 255  NPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGLITYMRTDGVHMSPD 314
            NP P +TT T+ + AS RL  SA  TM+IAQ L+EG        GLITY RTD   +S  
Sbjct: 893  NPLPPYTTDTMLRDASRRLRLSADETMQIAQDLFEG--------GLITYHRTDSTRVSDV 944

Query: 315  ALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRP---NDFDFLPSKMKQ---- 367
             +   R  +   +G+ Y   +PR +  +      AHEAIRP    D + L + +++    
Sbjct: 945  GIRVAREYLRKEFGEEYF--RPRSWGEEG-----AHEAIRPTRPIDVEELITLIEEGVIQ 997

Query: 368  ---FLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLCFDGF 424
                L  +  ++Y+LI++R +ASQM  AK  +    + A   D          L   DGF
Sbjct: 998  LPIRLTKNHLRVYDLIFRRFMASQMRPAKVLKEKAEVKADGKDVELE-ALVEIL--EDGF 1054

Query: 425  LKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLIKKMEEIG 484
              V    Y           LP +     L  TE    +        Y++  ++++M+E G
Sbjct: 1055 ALV----YPTRV-------LPELE-KGTLKVTEVEIRKVSKVYL--YTQGEVVEEMKERG 1100

Query: 485  IGRPSTYATILETLYKRKYVIAEK--RKILPQNTGRIVTAFLENFFSQYVEYDFTADLEE 542
            IGRPSTYA I+ETL +R YVI  K  +K++P   G  V  +L   + + V  + T  LEE
Sbjct: 1101 IGRPSTYAKIVETLLRRGYVIESKGRKKLIPTKLGIEVYEYLSEKYKKLVSEERTRRLEE 1160

Query: 543  KLDEISTGKLNWKEVLHEFWEEF 565
             +D++  GK +++EVL E +EE 
Sbjct: 1161 IMDKVEEGKADYQEVLKELYEEI 1183