RPSBLAST alignment for GI: 254780306 and conserved domain: COG1110
>gnl|CDD|31307 COG1110, COG1110, Reverse gyrase [DNA replication, recombination, and repair]. Length = 1187
Score = 285 bits (730), Expect = 4e-77
Identities = 182/623 (29%), Positives = 282/623 (45%), Gaps = 121/623 (19%)
Query: 4 IIVESPAKAKTISKYLGSNYK-------------------VLSSFGHIRDLPAKKG--SV 42
+IVESP KA+TI+ + G + +S GH+ DL + G V
Sbjct: 621 MIVESPNKARTIASFFGRPSVRRLGGGVVYEVAIGDLVLTITASGGHVFDLVTEPGVHGV 680
Query: 43 LPEKE-----FEMIWNIDPSSQKHL-----------------QNIIHAVKS-----STIL 75
L + ++ I ++ + + A++ IL
Sbjct: 681 LVKDGKYVPVYDTIKRCRDCGEQFVDSEDKCPRCGSRNVEDKTETVEALRELALEVDEIL 740
Query: 76 ILATDPDREGEAISWHVLDVLRQKNLIEKTKIQRVSFNAITKQVVLNAMKSPRDINLDLV 135
I TDPD EGE I+W V + LR N ++R+ F+ +T++ +L A+K+PRD++ +LV
Sbjct: 741 I-GTDPDTEGEKIAWDVFNYLRPYN----PNVKRIEFHEVTRRAILEALKNPRDVDENLV 795
Query: 136 NAYLARRALDYLVGFNLSPILWQKLPGAR-SAGRVQSVALRLICNRENQIESFVSEEYWS 194
A + RR D +GF LS LW SAGRVQ+ L I NR EEY
Sbjct: 796 KAQIVRRIEDRWIGFELSQKLWDVFNNKNLSAGRVQTPVLGWIVNRY--------EEY-- 845
Query: 195 LSVLLETPRNDKFTAHLTDFNGQRIEKKSISNKKEADDLISFVKKATYSVEKIENKPIKR 254
+ +L + N++E +++ +K V + + ++
Sbjct: 846 ----------KEKRGYLVIQLDLDLP---SGNREEVENVKRKLKLIVVEVVDVVEREEEK 892
Query: 255 NPWPAFTTSTLQQVASSRLGFSASHTMRIAQKLYEGIDVNGEIVGLITYMRTDGVHMSPD 314
NP P +TT T+ + AS RL SA TM+IAQ L+EG GLITY RTD +S
Sbjct: 893 NPLPPYTTDTMLRDASRRLRLSADETMQIAQDLFEG--------GLITYHRTDSTRVSDV 944
Query: 315 ALEAVRRSITSHYGDHYLPEKPRIYSSKSKNAQEAHEAIRP---NDFDFLPSKMKQ---- 367
+ R + +G+ Y +PR + + AHEAIRP D + L + +++
Sbjct: 945 GIRVAREYLRKEFGEEYF--RPRSWGEEG-----AHEAIRPTRPIDVEELITLIEEGVIQ 997
Query: 368 ---FLDSDQFQLYNLIWKRSVASQMASAKFERTTVNIIATYNDQIGHLRTTGSLLCFDGF 424
L + ++Y+LI++R +ASQM AK + + A D L DGF
Sbjct: 998 LPIRLTKNHLRVYDLIFRRFMASQMRPAKVLKEKAEVKADGKDVELE-ALVEIL--EDGF 1054
Query: 425 LKVWENQYDQEKNSEEDILLPYISANEQLIATETNASQHFTEPPPRYSESSLIKKMEEIG 484
V Y LP + L TE + Y++ ++++M+E G
Sbjct: 1055 ALV----YPTRV-------LPELE-KGTLKVTEVEIRKVSKVYL--YTQGEVVEEMKERG 1100
Query: 485 IGRPSTYATILETLYKRKYVIAEK--RKILPQNTGRIVTAFLENFFSQYVEYDFTADLEE 542
IGRPSTYA I+ETL +R YVI K +K++P G V +L + + V + T LEE
Sbjct: 1101 IGRPSTYAKIVETLLRRGYVIESKGRKKLIPTKLGIEVYEYLSEKYKKLVSEERTRRLEE 1160
Query: 543 KLDEISTGKLNWKEVLHEFWEEF 565
+D++ GK +++EVL E +EE
Sbjct: 1161 IMDKVEEGKADYQEVLKELYEEI 1183