HHsearch alignment for GI: 254780307 and conserved domain: CHL00194

Probab=98.24  E-value=1.1e-05  Score=53.86  Aligned_cols=91  Identities=16%  Similarity=0.156  Sum_probs=57.2

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCH-----HHHCCCCEEEECCCHHHH
Q ss_conf             179998166778999999997449980789999747658756002781589987794-----363188478606875899
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKS-----YDFSDTDICLMSAGHAVS   77 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~-----~~~~~~Divf~a~p~~~s   77 (335)
T Consensus         1 M~ILV~GATG~lGr~vVr~Ll~~G~~---Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al~GvdaVi~~~~~~~~   77 (319)
T CHL00194          1 MSLLVIGATGTLGRQIVRRALDEGYQ---VKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPALEGITAIIDASTSRPS   77 (319)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             97999899858999999999968890---899957867632342159679994278877899996599679994566778


Q ss_pred             -------------HHHHHHHCCCCE-EEEECCC
Q ss_conf             -------------999975045651-7996145
Q gi|254780307|r   78 -------------SQMSPKIAANGC-IVIDNSS   96 (335)
Q Consensus        78 -------------~~~~~~~~~~g~-~VIDlS~   96 (335)
T Consensus        78 ~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~  110 (319)
T CHL00194         78 DLNNAYQIDLEGKLALIEAAKAAKVKRFIFFSI  110 (319)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             862088988988999999999849988999613