HHsearch alignment for GI: 254780307 and conserved domain: COG0569
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].
Probab=92.33 E-value=0.43 Score=25.87 Aligned_cols=94 Identities=17% Similarity=0.322 Sum_probs=53.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCC-CEEEE--CCCCEEEEEECC-----HHHHCCCCEEEECCCH
Q ss_conf 179998166778999999997449980789999747658-75600--278158998779-----4363188478606875
Q gi|254780307|r 3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSA-GTKVP--FGKETIDVQDVK-----SYDFSDTDICLMSAGH 74 (335)
Q Consensus 3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~-G~~i~--~~~~~~~~~~~~-----~~~~~~~Divf~a~p~ 74 (335)
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~---~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH---NVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCEEEEEECC
T ss_conf 98999898-5788999999987899---0899976889999863200044999926889899986798638999998088
Q ss_pred HHHHHHHHHHCCC--CE--EEEECCCCHHC
Q ss_conf 8999999750456--51--79961451001
Q gi|254780307|r 75 AVSSQMSPKIAAN--GC--IVIDNSSAWRY 100 (335)
Q Consensus 75 ~~s~~~~~~~~~~--g~--~VIDlS~~~R~ 100 (335)
T Consensus 77 d~~N~i~~~la~~~~gv~~viar~~~~~~~ 106 (225)
T COG0569 77 DEVNSVLALLALKEFGVPRVIARARNPEHE 106 (225)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCHHH
T ss_conf 679999999999873998499995694167