HHsearch alignment for GI: 254780307 and conserved domain: COG1042
>COG1042 Acyl-CoA synthetase (NDP forming) [Energy production and conversion].
Probab=92.00 E-value=0.37 Score=26.28 Aligned_cols=115 Identities=19% Similarity=0.295 Sum_probs=64.0
Q ss_pred EEEEECCCCH---HHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHH-HCCCCEEEECCCHHHHHH
Q ss_conf 7999816677---899999999744998078999974765875600278158998779436-318847860687589999
Q gi|254780307|r 4 KVAVVGATGN---VGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYD-FSDTDICLMSAGHAVSSQ 79 (335)
Q Consensus 4 kvaIiGatG~---vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~-~~~~Divf~a~p~~~s~~ 79 (335)
T Consensus 12 svavigas~~~~~vg~~i~~nL~~~g--~g~i~PVnp~~~-----~v~G--~~ay~-s~~~lp~~~dlav~~v~~~~~~~ 81 (598)
T COG1042 12 SIAVIGASERPGKLGYEILRNLLEYG--QGKIYPVNPKYD-----EVLG--VKAYT-SVADLPDAPDLAVIVVPAKVVPE 81 (598)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCC--CCCEEECCCCCC-----CCCC--CCCCC-HHHHCCCCCCCEEEEECHHHHHH
T ss_conf 37887146875215799999998568--885574276532-----3366--31464-07557888770689852445689
Q ss_pred HHHHHCCCCEE-EEECCCCHHCCCCCCCCCCCHHHHHHCCCCC-CCEECCCCCC
Q ss_conf 99750456517-9961451001121112364101111103334-3121267643
Q gi|254780307|r 80 MSPKIAANGCI-VIDNSSAWRYDSDVPLIVPEVNPQTISLASR-KNIIANPNCS 131 (335)
Q Consensus 80 ~~~~~~~~g~~-VIDlS~~~R~~~d~p~~lPein~~~i~~~~~-~~~VanPgC~ 131 (335)
T Consensus 82 i~~~~~~kGv~~~i~is~gf~e~~~---~~~~~e~~~~~~a~~~~~rligPn~~ 132 (598)
T COG1042 82 IVHELGEKGVKGAIVISAGFREAGE---EGMELEKELVEAARKYGMRIIGPNCL 132 (598)
T ss_pred HHHHHCCCCCCEEEEECHHHHHHHH---HHHHHHHHHHHHHHHCCCEEECCCCC
T ss_conf 9987200587358996245678877---67677889999988559638623324