HHsearch alignment for GI: 254780307 and conserved domain: COG1712

Probab=97.44  E-value=0.00026  Score=45.37  Aligned_cols=141  Identities=24%  Similarity=0.353  Sum_probs=82.9

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCC-CEEE--ECCCCEEEEEECCHHHHCCCCEEEECCCHHHHHH
Q ss_conf             179998166778999999997449980789999747658-7560--0278158998779436318847860687589999
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSA-GTKV--PFGKETIDVQDVKSYDFSDTDICLMSAGHAVSSQ   79 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~-G~~i--~~~~~~~~~~~~~~~~~~~~Divf~a~p~~~s~~   79 (335)
T Consensus         1 l~vgiVGc-GaIG~~l~e~v~~~~-~~~e~v~v~D~~~ek~~~~~~~~~~~~--~s~ide~~-~~~DlvVEaAS~~Av~e   75 (255)
T COG1712           1 LKVGIVGC-GAIGKFLLELVRDGR-VDFELVAVYDRDEEKAKELEASVGRRC--VSDIDELI-AEVDLVVEAASPEAVRE   75 (255)
T ss_pred             CEEEEEEC-CHHHHHHHHHHHCCC-CCEEEEEEECCCHHHHHHHHHHCCCCC--CCCHHHHH-HCCCEEEEECCHHHHHH
T ss_conf             95789823-378899999986688-643699994488788888886038876--35677773-02442543078899999


Q ss_pred             HHHHHCCCCEEEEECC-CCHHCCCCCCCCCCCHHHHHH-CCCCCCCEECCCCCC---CCCCCCCCCHHH--HCCCCCCEE
Q ss_conf             9975045651799614-510011211123641011111-033343121267643---222111220011--017874114
Q gi|254780307|r   80 MSPKIAANGCIVIDNS-SAWRYDSDVPLIVPEVNPQTI-SLASRKNIIANPNCS---TIQLVVALKPLH--DLAMIKRVV  152 (335)
Q Consensus        80 ~~~~~~~~g~~VIDlS-~~~R~~~d~p~~lPein~~~i-~~~~~~~~VanPgC~---at~~~l~L~PL~--~~~~i~~v~  152 (335)
T Consensus        76 ~~~~~L~~g~d~iV~SVGALa-d~~-------l-~erl~~lak------~~~~rv~~pSGAiGGlD~l~aar~g~i~~V~  140 (255)
T COG1712          76 YVPKILKAGIDVIVMSVGALA-DEG-------L-RERLRELAK------CGGARVYLPSGAIGGLDALAAARVGGIEEVV  140 (255)
T ss_pred             HHHHHHHCCCCEEEEECHHCC-CHH-------H-HHHHHHHHH------CCCCEEEECCCCCHHHHHHHHHHCCCEEEEE
T ss_conf             869999659988999512206-867-------9-999999985------3894799337640127888874327702799


Q ss_pred             EEECCCCCCCC
Q ss_conf             65215221123
Q gi|254780307|r  153 VTTYQSVSGAG  163 (335)
Q Consensus       153 v~s~~g~SGaG  163 (335)
T Consensus       141 lttrKpp~~lg  151 (255)
T COG1712         141 LTTRKPPAELG  151 (255)
T ss_pred             EEEECCHHHHC
T ss_conf             97206847827