HHsearch alignment for GI: 254780307 and conserved domain: COG3268
>COG3268 Uncharacterized conserved protein [Function unknown].
Probab=93.09 E-value=0.073 Score=30.56 Aligned_cols=156 Identities=19% Similarity=0.187 Sum_probs=86.6
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEE---ECCCCEEEEEECC-----HHHHCCCCEEEECCC
Q ss_conf 61799981667789999999974499807899997476587560---0278158998779-----436318847860687
Q gi|254780307|r 2 TFKVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKV---PFGKETIDVQDVK-----SYDFSDTDICLMSAG 73 (335)
Q Consensus 2 ~~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i---~~~~~~~~~~~~~-----~~~~~~~Divf~a~p 73 (335)
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~----aLAgRs~-~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvG 80 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTA----ALAGRSS-AKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVG 80 (382)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCH----HHCCCCH-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEECCC
T ss_conf 4038997465521589999999748864----3216888-9998899850966444677888999999742668996146
Q ss_pred H--HHHHHHHHHHCCCCEEEEECCCCHHCCCCCCCCCCCHH-HHHHCCCCCCCEECCCCC--CCCCCCCCCCHHHHCCCC
Q ss_conf 5--89999997504565179961451001121112364101-111103334312126764--322211122001101787
Q gi|254780307|r 74 H--AVSSQMSPKIAANGCIVIDNSSAWRYDSDVPLIVPEVN-PQTISLASRKNIIANPNC--STIQLVVALKPLHDLAMI 148 (335)
Q Consensus 74 ~--~~s~~~~~~~~~~g~~VIDlS~~~R~~~d~p~~lPein-~~~i~~~~~~~~VanPgC--~at~~~l~L~PL~~~~~i 148 (335)
T Consensus 81 Pyt~~g~plv~aC~~~GTdY~DiTGEi~~f--------e~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~~~~~ 152 (382)
T COG3268 81 PYTRYGEPLVAACAAAGTDYADITGEIMFF--------ENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLKQALP 152 (382)
T ss_pred CCCCCCCHHHHHHHHHCCCEEECCCCHHHH--------HHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 612026479999997198724135617999--------999888777887559789666777767640189999986476
Q ss_pred C--------CEEEEEC--CCCCCCCCCCCCCH
Q ss_conf 4--------1146521--52211232110000
Q gi|254780307|r 149 K--------RVVVTTY--QSVSGAGKKGIDEL 170 (335)
Q Consensus 149 ~--------~v~v~s~--~g~SGaG~~~~~eL 170 (335)
T Consensus 153 d~~~~~~~t~l~l~s~t~~g~S~GTaat~~e~ 184 (382)
T COG3268 153 DGTEELIATHLALGSFTGSGISGGTAATSVEG 184 (382)
T ss_pred CCCCCHHHHHEEEEECCCCCCCCCCHHHHHHH
T ss_conf 44442233210013125677465209989999