HHsearch alignment for GI: 254780307 and conserved domain: PRK00141

Probab=92.65  E-value=0.29  Score=26.93  Aligned_cols=85  Identities=22%  Similarity=0.254  Sum_probs=52.1

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCC-CEEEECC-CCEEEEEECCHHHHCCCCEEEECCCHHHHHHH
Q ss_conf             179998166778999999997449980789999747658-7560027-81589987794363188478606875899999
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSA-GTKVPFG-KETIDVQDVKSYDFSDTDICLMSAGHAVSSQM   80 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~-G~~i~~~-~~~~~~~~~~~~~~~~~Divf~a~p~~~s~~~   80 (335)
T Consensus        18 ~kvlV~Gl-G~SG~s~a~~L~~~G~---~v~~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~vV~SPGI~~~~p~   92 (476)
T PRK00141         18 GRVLVAGA-GVSGLGIAKMLSELGC---DVVVADDNETQRHMLIEVVDVADIST-AQASDALDSYSIVVTSPGWRPDSPL   92 (476)
T ss_pred             CCEEEEEE-CHHHHHHHHHHHHCCC---EEEEEECCCCHHHHHHHHCCCCEECC-CCHHHHHCCCCEEEECCCCCCCCHH
T ss_conf             98899922-7889999999997899---79999899870357887479856515-5306564689999989978997999


Q ss_pred             HHHHCCCCEEEE
Q ss_conf             975045651799
Q gi|254780307|r   81 SPKIAANGCIVI   92 (335)
Q Consensus        81 ~~~~~~~g~~VI   92 (335)
T Consensus        93 l~~a~~~gi~vi  104 (476)
T PRK00141         93 LVDAQSAGLEVI  104 (476)
T ss_pred             HHHHHHCCCCEE
T ss_conf             999998799577