HHsearch alignment for GI: 254780307 and conserved domain: PRK01368

>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.33  E-value=0.025  Score=33.40  Aligned_cols=95  Identities=8%  Similarity=0.141  Sum_probs=57.5

Q ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHHHCCCCEEEECCCHHHHHHHHHH
Q ss_conf             79998166778999999997449980789999747658756002781589987794363188478606875899999975
Q gi|254780307|r    4 KVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYDFSDTDICLMSAGHAVSSQMSPK   83 (335)
Q Consensus         4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~~~~~Divf~a~p~~~s~~~~~~   83 (335)
T Consensus         8 ~v~V~Gl-G~sG~a~~~~L~~~----~~~~~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~iV~SPGI~~~~p~~~~   82 (450)
T PRK01368          8 KIGVFGL-GKTGISVYEELQNK----YDLIVYDDLKANRDIFEELFSKNAIIALSDSRWQNLDKIVLSPGIPLTHEIVKI   82 (450)
T ss_pred             EEEEEEE-CHHHHHHHHHHHHC----CCEEEEECCCCCHHHHHHHHCCCCEECCCCCCHHCCCEEEECCCCCCCCHHHHH
T ss_conf             0899958-78799999999719----998999899656478997521483602571115219999989961998999999


Q ss_pred             HCCCCEEEEECC-CCHHCCCC
Q ss_conf             045651799614-51001121
Q gi|254780307|r   84 IAANGCIVIDNS-SAWRYDSD  103 (335)
Q Consensus        84 ~~~~g~~VIDlS-~~~R~~~d  103 (335)
T Consensus        83 a~~~~i~i~~eiel~~~~~~~  103 (450)
T PRK01368         83 AKNFNIPITSDIDLLFEKSKN  103 (450)
T ss_pred             HHHCCCCEEEHHHHHHHHCCC
T ss_conf             998799587699999976679