HHsearch alignment for GI: 254780307 and conserved domain: PRK01368
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.33 E-value=0.025 Score=33.40 Aligned_cols=95 Identities=8% Similarity=0.141 Sum_probs=57.5
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHHHCCCCEEEECCCHHHHHHHHHH
Q ss_conf 79998166778999999997449980789999747658756002781589987794363188478606875899999975
Q gi|254780307|r 4 KVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYDFSDTDICLMSAGHAVSSQMSPK 83 (335)
Q Consensus 4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~~~~~Divf~a~p~~~s~~~~~~ 83 (335)
T Consensus 8 ~v~V~Gl-G~sG~a~~~~L~~~----~~~~~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~iV~SPGI~~~~p~~~~ 82 (450)
T PRK01368 8 KIGVFGL-GKTGISVYEELQNK----YDLIVYDDLKANRDIFEELFSKNAIIALSDSRWQNLDKIVLSPGIPLTHEIVKI 82 (450)
T ss_pred EEEEEEE-CHHHHHHHHHHHHC----CCEEEEECCCCCHHHHHHHHCCCCEECCCCCCHHCCCEEEECCCCCCCCHHHHH
T ss_conf 0899958-78799999999719----998999899656478997521483602571115219999989961998999999
Q ss_pred HCCCCEEEEECC-CCHHCCCC
Q ss_conf 045651799614-51001121
Q gi|254780307|r 84 IAANGCIVIDNS-SAWRYDSD 103 (335)
Q Consensus 84 ~~~~g~~VIDlS-~~~R~~~d 103 (335)
T Consensus 83 a~~~~i~i~~eiel~~~~~~~ 103 (450)
T PRK01368 83 AKNFNIPITSDIDLLFEKSKN 103 (450)
T ss_pred HHHCCCCEEEHHHHHHHHCCC
T ss_conf 998799587699999976679