HHsearch alignment for GI: 254780307 and conserved domain: PRK05472

Probab=97.23  E-value=0.0014  Score=41.04  Aligned_cols=92  Identities=27%  Similarity=0.381  Sum_probs=67.4

Q ss_pred             CEEEEEECCCCHHHHHHHHHH--HHCCCCEEEEEEEE--CCCCCCEEEECCCCEEEEEECCHHH----HCCCCEEEECCC
Q ss_conf             617999816677899999999--74499807899997--4765875600278158998779436----318847860687
Q gi|254780307|r    2 TFKVAVVGATGNVGREMLNII--CERGFPISEVVALA--SERSAGTKVPFGKETIDVQDVKSYD----FSDTDICLMSAG   73 (335)
Q Consensus         2 ~~kvaIiGatG~vG~el~~lL--~~~~~p~~~l~~~~--s~~~~G~~i~~~~~~~~~~~~~~~~----~~~~Divf~a~p   73 (335)
T Consensus        84 ~~~v~lvGa-GnLG~AL~~y~gf~~---~gf~Iva~FD~dp~kiG~~i----~gi~V~~i~~L~~~i~~~~i~iaIiaVP  155 (211)
T PRK05472         84 TTNVALVGA-GNLGRALLNYNGFKK---RGFKIVAAFDVDPEKVGTKI----GGIPVYHIDELEEVIKENDIEIAILTVP  155 (211)
T ss_pred             CCEEEEECC-CHHHHHHHHCCCHHH---CCCEEEEEECCCHHHCCCEE----CCEEEECHHHHHHHHHHHCCCEEEEECC
T ss_conf             750899888-779999984876231---89789999748978859883----8838734999999999819938999557


Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHCC
Q ss_conf             5899999975045651799614510011
Q gi|254780307|r   74 HAVSSQMSPKIAANGCIVIDNSSAWRYD  101 (335)
Q Consensus        74 ~~~s~~~~~~~~~~g~~VIDlS~~~R~~  101 (335)
T Consensus       156 ~~~AQ~vad~Lv~aGIk~IlNFap~~L~  183 (211)
T PRK05472        156 AEAAQEVADRLVEAGIKGILNFAPVRLN  183 (211)
T ss_pred             HHHHHHHHHHHHHHCCEEEEECCCCCCC
T ss_conf             6889999999998198399976872447