HHsearch alignment for GI: 254780307 and conserved domain: PRK06444

>PRK06444 prephenate dehydrogenase; Provisional.
Probab=96.36  E-value=0.012  Score=35.24  Aligned_cols=61  Identities=18%  Similarity=0.306  Sum_probs=50.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHHHCCCCEEEECCCHHHHHHHHH
Q ss_conf             17999816677899999999744998078999974765875600278158998779436318847860687589999997
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYDFSDTDICLMSAGHAVSSQMSP   82 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~~~~~Divf~a~p~~~s~~~~~   82 (335)
T Consensus         1 ~~~~iig~~gr~g~~~~~~~~~~g~---~v~----------------------------i~k~D~ifiaVPI~~~~~iI~   49 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGL---GVY----------------------------IKKADHAFLSVPIDAALNYIE   49 (197)
T ss_pred             CCEEEECCCCCHHHHHHHHHCCCCC---EEE----------------------------ECCCCEEEEEEEHHHHHHHHH
T ss_conf             9169963787166899999703784---789----------------------------727888999824588899998


Q ss_pred             HHCCCCEEEEECCCC
Q ss_conf             504565179961451
Q gi|254780307|r   83 KIAANGCIVIDNSSA   97 (335)
Q Consensus        83 ~~~~~g~~VIDlS~~   97 (335)
T Consensus        50 ---~~~~tiiDv~SV   61 (197)
T PRK06444         50 ---SYDNNFVEISSV   61 (197)
T ss_pred             ---HCCCEEEEEEEC
T ss_conf             ---479738998863