HHsearch alignment for GI: 254780307 and conserved domain: PRK06444
>PRK06444 prephenate dehydrogenase; Provisional.
Probab=96.36 E-value=0.012 Score=35.24 Aligned_cols=61 Identities=18% Similarity=0.306 Sum_probs=50.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHHHCCCCEEEECCCHHHHHHHHH
Q ss_conf 17999816677899999999744998078999974765875600278158998779436318847860687589999997
Q gi|254780307|r 3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYDFSDTDICLMSAGHAVSSQMSP 82 (335)
Q Consensus 3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~~~~~Divf~a~p~~~s~~~~~ 82 (335)
T Consensus 1 ~~~~iig~~gr~g~~~~~~~~~~g~---~v~----------------------------i~k~D~ifiaVPI~~~~~iI~ 49 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGL---GVY----------------------------IKKADHAFLSVPIDAALNYIE 49 (197)
T ss_pred CCEEEECCCCCHHHHHHHHHCCCCC---EEE----------------------------ECCCCEEEEEEEHHHHHHHHH
T ss_conf 9169963787166899999703784---789----------------------------727888999824588899998
Q ss_pred HHCCCCEEEEECCCC
Q ss_conf 504565179961451
Q gi|254780307|r 83 KIAANGCIVIDNSSA 97 (335)
Q Consensus 83 ~~~~~g~~VIDlS~~ 97 (335)
T Consensus 50 ---~~~~tiiDv~SV 61 (197)
T PRK06444 50 ---SYDNNFVEISSV 61 (197)
T ss_pred ---HCCCEEEEEEEC
T ss_conf ---479738998863