HHsearch alignment for GI: 254780307 and conserved domain: PRK08655

Probab=98.11  E-value=2.5e-05  Score=51.59  Aligned_cols=122  Identities=19%  Similarity=0.336  Sum_probs=78.9

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEEC--CHHHHCCCCEEEECCCHHHHHHH
Q ss_conf             1799981667789999999974499807899997476587560027815899877--94363188478606875899999
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDV--KSYDFSDTDICLMSAGHAVSSQM   80 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~--~~~~~~~~Divf~a~p~~~s~~~   80 (335)
T Consensus         1 mkI~IIGG~G~MG~~Fa~~f~~sGy---eV~I~gRd~~k~~~va~---~LGv~~~~~~~e~~~~advVIvsVPI~~T~~V   74 (441)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKDKGY---EVIVWGRDPKKGKEVAK---ELGVEYASDNIDAAKDGDIVIVSVPINVTEDV   74 (441)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHCCC---EEEEEECCCCHHHHHHH---HHCCCCCCCHHHHHHCCCEEEEECCHHHHHHH
T ss_conf             9799994798177999999986798---89998157313567888---73862224478897249999998488999999


Q ss_pred             HHHH---CCCCEEEEECCCCHH-----C----CCCCC-CCCCCHHHHHHCCCCCCCEECCCCC
Q ss_conf             9750---456517996145100-----1----12111-2364101111103334312126764
Q gi|254780307|r   81 SPKI---AANGCIVIDNSSAWR-----Y----DSDVP-LIVPEVNPQTISLASRKNIIANPNC  130 (335)
Q Consensus        81 ~~~~---~~~g~~VIDlS~~~R-----~----~~d~p-~~lPein~~~i~~~~~~~~VanPgC  130 (335)
T Consensus        75 I~~laP~l~~~~lL~DitSvK~~p~~aMl~~~~~~~~viglHPMFGP~v~sl~gQvVVvcP~~  137 (441)
T PRK08655         75 IREVAPHVKEGSLLMDVTSVKERPVEAMKEFAPEGVEILPTHPMFGPRTPSLRGQVVILTPTE  137 (441)
T ss_pred             HHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEEEEECCC
T ss_conf             999742489996999831041779999997565788774548887999866578889996389