HHsearch alignment for GI: 254780307 and conserved domain: PRK08818

Probab=94.79  E-value=0.23  Score=27.58  Aligned_cols=79  Identities=19%  Similarity=0.304  Sum_probs=55.0

Q ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHH-HCCCCEEEECCCHHHHHHHHH
Q ss_conf             7999816677899999999744998078999974765875600278158998779436-318847860687589999997
Q gi|254780307|r    4 KVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYD-FSDTDICLMSAGHAVSSQMSP   82 (335)
Q Consensus         4 kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~-~~~~Divf~a~p~~~s~~~~~   82 (335)
T Consensus         6 iV~iiG~~~~~G~w~a~flr~~----~~~~vig~dp~~~~------------s~D~~~l~~~aDIVIisVPI~~T~~vI~   69 (373)
T PRK08818          6 VVGIVGIAGAYGRWLAQFLRTR----MQLEVIGYDPADPG------------SLDPATLLARADVLVFSAPIRHTAALIE   69 (373)
T ss_pred             EEEEEECCCHHHHHHHHHHHHC----CCEEEEECCCCCCC------------CCCHHHHHHCCCEEEEECCHHHHHHHHH
T ss_conf             3899626632658999998743----66178854887756------------6698898623898999778032388998


Q ss_pred             H---HC---CCCEEEEECCCCH
Q ss_conf             5---04---5651799614510
Q gi|254780307|r   83 K---IA---ANGCIVIDNSSAW   98 (335)
Q Consensus        83 ~---~~---~~g~~VIDlS~~~   98 (335)
T Consensus        70 E~~~~Ap~~~~gsLLmDVTSIK   91 (373)
T PRK08818         70 RYVALAGARAAGQLWLDVTSIK   91 (373)
T ss_pred             HHHHCCCCCCCCCEEEEEHHHH
T ss_conf             8774165567885688503340