HHsearch alignment for GI: 254780307 and conserved domain: PRK09599

Probab=96.09  E-value=0.0091  Score=36.04  Aligned_cols=89  Identities=13%  Similarity=0.256  Sum_probs=51.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHHHH-CCCC---EEEECCCHHHHH
Q ss_conf             179998166778999999997449980789999747658756002781589987794363-1884---786068758999
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSYDF-SDTD---ICLMSAGHAVSS   78 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~~~-~~~D---ivf~a~p~~~s~   78 (335)
T Consensus         1 MkIGfIGL-G~MG~~mA~nL~~~G~~V---~v~dr~~~--~~~~~~~~ga~~~-~s~~e~~~~~d~prvI~l~lp~~~~V   73 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGHEV---VGYDRNPE--AVEALAAEGATGA-ASLEELVAKLPAPRVVWLMVPAGEIT   73 (301)
T ss_pred             CEEEEECH-HHHHHHHHHHHHHCCCEE---EEECCCHH--HHHHHHHCCCEEC-CCHHHHHHHCCCCCEEEEECCCCHHH
T ss_conf             97999834-587999999999689907---99769999--9999998599432-99999997078887799981797038


Q ss_pred             -HHHHH---HCCCCEEEEECCCCH
Q ss_conf             -99975---045651799614510
Q gi|254780307|r   79 -QMSPK---IAANGCIVIDNSSAW   98 (335)
Q Consensus        79 -~~~~~---~~~~g~~VIDlS~~~   98 (335)
T Consensus        74 d~Vi~~l~~~l~~g~iiID~sts~   97 (301)
T PRK09599         74 DSTIDELAPLLEAGDIVIDGGNSY   97 (301)
T ss_pred             HHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             999999996278998887089998