HHsearch alignment for GI: 254780307 and conserved domain: TIGR01777
>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=96.13 E-value=0.0045 Score=37.87 Aligned_cols=70 Identities=21% Similarity=0.320 Sum_probs=41.4
Q ss_pred EEEECC-CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCE-EEECCCCEEEE------EECCHH--HHCCCCEEEECCCH
Q ss_conf 999816-677899999999744998078999974765875-60027815899------877943--63188478606875
Q gi|254780307|r 5 VAVVGA-TGNVGREMLNIICERGFPISEVVALASERSAGT-KVPFGKETIDV------QDVKSY--DFSDTDICLMSAGH 74 (335)
Q Consensus 5 vaIiGa-tG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~-~i~~~~~~~~~------~~~~~~--~~~~~Divf~a~p~ 74 (335)
T Consensus 1 ~litGgnTGfiG~~L~~~L~~~g~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~W~~l~~~DaviNLAG~ 77 (307)
T TIGR01777 1 ILITGGNTGFIGRALTQRLTKSGH---EVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIAESGWSALEGADAVINLAGE 77 (307)
T ss_pred CEECCCCCCHHHHHHHHHHHHCCC---EEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEECCCC
T ss_conf 964153302378999999984799---89999616864320002554455552212452072205667886279855688
Q ss_pred HHH
Q ss_conf 899
Q gi|254780307|r 75 AVS 77 (335)
Q Consensus 75 ~~s 77 (335)
T Consensus 78 ~i~ 80 (307)
T TIGR01777 78 PIA 80 (307)
T ss_pred CCC
T ss_conf 857