HHsearch alignment for GI: 254780307 and conserved domain: TIGR01850

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase; InterPro: IPR000706 N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymatic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined . The pathway from glutamate to arginine is: NAGS; N-acetylglutamate synthase (2.3.1.1 from EC) (glutamate to N-acetylglutamate) NAGK; N-acetylglutamate kinase (2.7.2.8 from EC) (N-acetylglutamate to N-acetylglutamate-5P) NAGSA; N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (N-acetylglutamate-5P to N-acetylglumate semialdehyde) Acetylornithine aminotransferase (2.6.1.11 from EC) (N-acetylglumate semialdehyde to N-acetylornithine) Acetylornithine deacetylase (3.5.1.16 from EC) (N-acetylornithine to ornithine) Arginase (3.5.3.1 from EC) (ornithine to arginine) N-acetyl-gamma-glutamyl-phosphate reductase (1.2.1.38 from EC) (AGPR) , is the enzyme that catalyzes the third step in the biosynthesis of arginine from glutamate, the NADP-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38 kD (gene argC), while in fungi it is part of a bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) which contains a N-terminal acetylglutamate kinase (2.7.2.8 from EC) domain and a C-terminal AGPR domain. In the Escherichia coli enzyme, a cysteine has been shown to be implicated in the catalytic activity, and the region around this residue is well conserved.; GO: 0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity, 0006526 arginine biosynthetic process.
Probab=100.00  E-value=0  Score=571.09  Aligned_cols=303  Identities=25%  Similarity=0.369  Sum_probs=251.9

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCC--CCEEEECC------CCE-EEEEECCH---HHH--CCCCEE
Q ss_conf             17999816677899999999744998078999974765--87560027------815-89987794---363--188478
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERS--AGTKVPFG------KET-IDVQDVKS---YDF--SDTDIC   68 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~--~G~~i~~~------~~~-~~~~~~~~---~~~--~~~Div   68 (335)
T Consensus         1 ~~V~IvGAsGYtG~EL~RLL~--~HP~~e~~~~~ss~~~~aG~~~~~~~P~L~g~~~~~~~~~~~~~~~~~~~L~~~DvV   78 (361)
T TIGR01850         1 IKVGIVGASGYTGGELLRLLA--NHPEVEITYLVSSRESLAGKPLSEVHPHLRGLVDYLNLEPLDDAKLEEIELEDADVV   78 (361)
T ss_pred             CEEEEEECCCHHHHHHHHHHH--CCCCEEEEEEEEEEEHHCCCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEE
T ss_conf             968999334446899999984--199537888887620113852577366111010023336667667888621376789


Q ss_pred             EECCCHHHHHHHHHHHCCCCEEEEECCCCHHCCC------------------CCCCCCCCHH--HHHHCCCCCCCEECCC
Q ss_conf             6068758999999750456517996145100112------------------1112364101--1111033343121267
Q gi|254780307|r   69 LMSAGHAVSSQMSPKIAANGCIVIDNSSAWRYDS------------------DVPLIVPEVN--PQTISLASRKNIIANP  128 (335)
Q Consensus        69 f~a~p~~~s~~~~~~~~~~g~~VIDlS~~~R~~~------------------d~p~~lPein--~~~i~~~~~~~~VanP  128 (335)
T Consensus        79 FlAlPhgvs~~~~p~~l~~g~~ViDLSADFRl~d~~~Ye~wYG~h~~~~ll~~avYGLpEl~~~re~i~~A~---liAnP  155 (361)
T TIGR01850        79 FLALPHGVSMELAPELLEAGVKVIDLSADFRLKDPEVYEKWYGFHAAPELLQEAVYGLPELHGAREEIKGAR---LIANP  155 (361)
T ss_pred             EECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCC---EEECC
T ss_conf             986872556999999984798699888343369979999966778896666311556767010588984295---76448


Q ss_pred             CCCCCCCCCCCCHHHHCCCCC---CEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             643222111220011017874---11465215221123211000000000000124554444551013740422553234
Q gi|254780307|r  129 NCSTIQLVVALKPLHDLAMIK---RVVVTTYQSVSGAGKKGIDELLAQTKAFLAKKTIENRVFTKNIAFNVIPHIDVFMD  205 (335)
Q Consensus       129 gC~at~~~l~L~PL~~~~~i~---~v~v~s~~g~SGaG~~~~~eL~~q~~~~~~~~~~~~~~~~~~la~n~iP~i~~~~~  205 (335)
T Consensus       156 GCYpTA~~LaL~PL~~~~l~~~~~~~i~dakSGvSGAGr~as~----------------~~~~-~E~~en~~pY~--~~-  215 (361)
T TIGR01850       156 GCYPTATLLALAPLLKEGLIDPTSEIIVDAKSGVSGAGRKASE----------------KSHF-PEVNENLRPYK--VT-  215 (361)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCC----------------CCCH-HHHHCCCEECC--CC-
T ss_conf             8617899999899998315676776589887445566777763----------------3573-44327706203--79-


Q ss_pred             CCCCCHHHHEEEEEEEEECC--CCCCCCCCEEEEEEECCEEEEEEEECCC-CCHHHHHHHHHHCCCCE-EECCCC--CCC
Q ss_conf             72000011011210001023--4322112001121102157987672465-87899987310069838-810268--899
Q gi|254780307|r  206 GGSTKEEWKVLVETQKILDP--NIKVSCTAARVPVFIGHAESVNIEFEKD-ISIKDAVAAINKSKGCI-VVDKPD--KNE  279 (335)
Q Consensus       206 ~g~~~ee~k~~~E~~kil~~--~~~v~~t~~~vPv~rG~~~ti~i~l~~~-~~~~~i~~~~~~~~~~~-~~~~~~--~~~  279 (335)
T Consensus       216 -G~HRH~PEI~q~L~~~~~~~~~~~v~FTPHL~P~~RGIl~T~~~~l~~~~~~~~~~~~~Y~~~Y~~epFVrv~~~G~~~  294 (361)
T TIGR01850       216 -GGHRHTPEIEQELGKLAGGIDKVKVSFTPHLVPMTRGILATIYAKLKDGSLTEEDLRKLYEEFYADEPFVRVLPKGEGE  294 (361)
T ss_pred             -CCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             -9850279999987676304487279998631262353201276872689988899999999971279717982277898


Q ss_pred             CCCHHHHCCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             97615434897326752776366888699999701302236799999999988
Q gi|254780307|r  280 YITPVESIRRDLVFVSRIRKDPTLKSGLNLWIVANNLRKGAALNAVQIAELVA  332 (335)
Q Consensus       280 ~~~~~~~~g~~~v~Vgrvr~~~~~~~~~~~~~~~DNL~kGAAg~AVq~anlm~  332 (335)
T Consensus       295 ~P~tk~V~GsN~cdIGG~~~d~~~-~r~vv~SaIDNLvKGAAGQAvQN~N~m~  346 (361)
T TIGR01850       295 YPSTKAVRGSNFCDIGGFAVDERT-GRVVVVSAIDNLVKGAAGQAVQNMNLMF  346 (361)
T ss_pred             CCCEEEEEECCCEEEEEEEEECCC-CEEEEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf             786147753583887337886578-8899998521124679999999998635