HHsearch alignment for GI: 254780307 and conserved domain: TIGR03466

>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.86  E-value=0.00018  Score=46.42  Aligned_cols=92  Identities=25%  Similarity=0.256  Sum_probs=52.1

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCEEEEEECCHH-----HHCCCCEEEECCCH---
Q ss_conf             1799981667789999999974499807899997476587560027815899877943-----63188478606875---
Q gi|254780307|r    3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASERSAGTKVPFGKETIDVQDVKSY-----DFSDTDICLMSAGH---   74 (335)
Q Consensus         3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~~~~G~~i~~~~~~~~~~~~~~~-----~~~~~Divf~a~p~---   74 (335)
T Consensus         1 MriLVTGgtGfiG~~l~~~L~~~G~---~V~~l~r~~~~~~~~~~~~~~~~~gDl~d~~~~~~~~~~~d~ViH~Aa~~~~   77 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLERGE---EVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKALAGCRALFHVAADYRL   77 (328)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             9499986777999999999997849---8999989998655652179779982079999999997178589761342344


Q ss_pred             -------------HHHHHHHHHHCCCCE-EEEECCCC
Q ss_conf             -------------899999975045651-79961451
Q gi|254780307|r   75 -------------AVSSQMSPKIAANGC-IVIDNSSA   97 (335)
Q Consensus        75 -------------~~s~~~~~~~~~~g~-~VIDlS~~   97 (335)
T Consensus        78 ~~~~~~~~~~~Nv~gt~nll~aa~~~~v~r~V~~SS~  114 (328)
T TIGR03466        78 WAPDPEEMYRANVEGTRNLLRAALEAGVERVVYTSSV  114 (328)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             6799899999999999999999997298743156335