HHsearch alignment for GI: 254780307 and conserved domain: cd05293
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.02 E-value=0.1 Score=29.69 Aligned_cols=69 Identities=25% Similarity=0.295 Sum_probs=40.0
Q ss_pred EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECC--CCCCEEEEC------CCCEEEEEECCHHHHCCCCEEEECCC
Q ss_conf 179998166778999999997449980789999747--658756002------78158998779436318847860687
Q gi|254780307|r 3 FKVAVVGATGNVGREMLNIICERGFPISEVVALASE--RSAGTKVPF------GKETIDVQDVKSYDFSDTDICLMSAG 73 (335)
Q Consensus 3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s~--~~~G~~i~~------~~~~~~~~~~~~~~~~~~Divf~a~p 73 (335)
T Consensus 4 ~Kv~IIGa-G~VG~~~A~~l~~~~-l~~el~L~Di~~~~a~g~a~Dl~h~~~~~~~~~v~~~~d~~~~~~aDvVVitAG 80 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAG 80 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEECCC
T ss_conf 86999897-888999999999669-988799993889833268888660401279855993799999689999998899