HHsearch alignment for GI: 254780307 and conserved domain: pfam00899
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=95.06 E-value=0.24 Score=27.42 Aligned_cols=90 Identities=14% Similarity=0.251 Sum_probs=54.8
Q ss_pred EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEC----CCCCCEEEECC-------------------CCEEEEE----
Q ss_conf 17999816677899999999744998078999974----76587560027-------------------8158998----
Q gi|254780307|r 3 FKVAVVGATGNVGREMLNIICERGFPISEVVALAS----ERSAGTKVPFG-------------------KETIDVQ---- 55 (335)
Q Consensus 3 ~kvaIiGatG~vG~el~~lL~~~~~p~~~l~~~~s----~~~~G~~i~~~-------------------~~~~~~~---- 55 (335)
T Consensus 2 skVlivG~-GglG~~~~~~La~~Gvg--~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~ 78 (134)
T pfam00899 2 SRVLVVGA-GGLGSPAAEYLARAGVG--KLTLVDFDTVELSNLNRQILFTESDIGKPKAEVAKERLRAINPDVEVEAYPE 78 (134)
T ss_pred CEEEEECC-CHHHHHHHHHHHHHCCC--EEEEEECCCCCCCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 88999898-88999999999993897--4999989567632227224233646688107999999997789958999925
Q ss_pred ECCHH----HHCCCCEEEECCCHHHHHHHHHHH-CCCCEEEEECC
Q ss_conf 77943----631884786068758999999750-45651799614
Q gi|254780307|r 56 DVKSY----DFSDTDICLMSAGHAVSSQMSPKI-AANGCIVIDNS 95 (335)
Q Consensus 56 ~~~~~----~~~~~Divf~a~p~~~s~~~~~~~-~~~g~~VIDlS 95 (335)
T Consensus 79 ~i~~~~~~~~~~~~DvVi~~~Dn~~~r~~ln~~c~~~~ip~i~~~ 123 (134)
T pfam00899 79 RLTPENLEELLKGADLVVDALDNFAARYLLNDACVKRGIPLISAG 123 (134)
T ss_pred CCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 679778764264488999998999999999999998599899955