RPSBLAST alignment for GI: 254780307 and conserved domain: TIGR00978
>gnl|CDD|162144 TIGR00978, asd_EA, aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. Length = 341
Score = 181 bits (461), Expect = 2e-46
Identities = 119/375 (31%), Positives = 172/375 (45%), Gaps = 86/375 (22%)
Query: 4 KVAVVGATGNVGREMLNIICERGFPISEVVAL-ASERSAGTK------------VPFGKE 50
+VAV+GATG VG++ + ++ P E+ + AS RSAG + +P
Sbjct: 2 RVAVLGATGLVGQKFVKLL--AKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVR 59
Query: 51 TIDVQDVKSYDFSDTDICLMSAGHAVSSQMSPKIAANGCIVIDNSSAWRYDSDVPLIVPE 110
+ + + + D DI + V+ ++ PK+A G V N+S R D DVPLI+PE
Sbjct: 60 DLPIVEPEPVASKDVDIVFSALPSEVAEEVEPKLAEAGKPVFSNASNHRMDPDVPLIIPE 119
Query: 111 VNPQTISLASRKN-------IIANPNCSTIQLVVALKPLHDLAMIKRVVVTTYQSVSGAG 163
VN + L + I+ NPNC+T L +ALKPL D IK+V VTT Q+VSGAG
Sbjct: 120 VNSDHLELLKVQKERGWKGFIVTNPNCTTAGLTLALKPLIDAFGIKKVHVTTMQAVSGAG 179
Query: 164 KKGIDELLAQTKAFLAKKTIENRVFTKNIAFNVIPHIDVFMDGGSTKEEWKVLVETQKIL 223
G+ + +I N+IPHI EE K+ ET+KIL
Sbjct: 180 YPGVPSM--------------------DILDNIIPHI--------GGEEEKIERETRKIL 211
Query: 224 ---------DPNIKVSCTAARVPVFIGHAESVNIEFEKDISIKDAVAAINKSKG------ 268
VS T RVPV GH ESV++EF+K I++ A+ +G
Sbjct: 212 GKLENGKIEPAPFSVSATTTRVPVLDGHTESVHVEFDKKFDIEEIREALKSFRGLPQKLG 271
Query: 269 --------CIVVDKPDKNEYITPVESIRRDL-----VFVSRIRKDPTLKSGLNLWIVANN 315
IV D+ D+ P + RD V V R+R++ L ++ +N
Sbjct: 272 LPSAPEKPIIVRDEEDR-----PQPRLDRDAGGGMAVTVGRLREEG---GSLKYVVLGHN 323
Query: 316 LRKGAALNAVQIAEL 330
L +GAA + AEL
Sbjct: 324 LVRGAAGATLLNAEL 338