HHsearch alignment for GI: 254780308 and conserved domain: TIGR02283
>TIGR02283 MltB_2 lytic murein transglycosylase; InterPro: IPR011970 Proteins of this entries are closely related to the MltB family lytic murein transglycosylases described by IPR011757 from INTERPRO and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many proteins of this entry(unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (IPR002477 from INTERPRO), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does Esherichia coli MltB in IPR011757 from INTERPRO..
Probab=100.00 E-value=0 Score=668.23 Aligned_cols=239 Identities=38% Similarity=0.629 Sum_probs=230.1
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC--CHHHHH-----HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 08999999999999839998999998608777--702333-----20256666777989998764001357999998532
Q gi|254780308|r 41 RFGEWKSAARARAVREGMSPKTAKHLFADLEY--LDTTIA-----RDRKMVTSPPVSFKDYLDGLSSSEIIAQGIALKKA 113 (288)
Q Consensus 41 ~F~~wl~~l~~~A~~~Gis~~tl~~~f~~~~~--~~~VI~-----~dr~Qp~ef~~t~~~Y~~~~vs~~Ri~~Gr~~~~~ 113 (288)
T Consensus 1 ~F~~wl~~~~~~A~a~Gis~~t~d~a~~g~~~~pD~~v~~e~~~~~dr~Q~~eF~~~~~~Y~~~~~~~~r~~~G~~~~~~ 80 (313)
T TIGR02283 1 AFDAWLAQLRAEAAAKGISAATFDRAFAGVKPEPDQSVLNERKATLDRAQPKEFTQTFWDYLSRRVSPKRIAIGRALLQR 80 (313)
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 93678999999998648988899998558723015031167888710136643576789997630147899999999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCC----CCHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHCCCCCHH-
Q ss_conf 34699999998389988944523100221010256----41899998753275-3156654789999998643877700-
Q gi|254780308|r 114 NSRLLINLKKEYGVPPGILMALWGLETHFGETMGK----TPLLSTLATLAYDC-RRAKFFTEQFFYALDLVKKGVISSH- 187 (288)
Q Consensus 114 ~~~~L~~ie~~yGV~~~ii~AiwGiET~yG~~~G~----~~vl~aLaTLA~d~-RR~~ff~~el~a~l~~~~~g~~~~~- 187 (288)
T Consensus 81 ~~~~L~~iE~~yGVp~~~l~AiWGmEs~fG~~~g~~~~M~dv~~sLATLAy~~~RR~~~F~~EL~aALkI~q~Gd~~~~~ 160 (313)
T TIGR02283 81 YAALLARIEKRYGVPAEILLAIWGMESDFGAYQGKDDVMFDVIRSLATLAYDGARRKDFFRTELIAALKILQRGDLTRAA 160 (313)
T ss_pred HHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 99999998752388810410001134131031167510133899999986246655567668999999976057788465
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCCCCC-----------------
Q ss_conf 03675235786665522444215367899987887898889999999999729-888589764-----------------
Q gi|254780308|r 188 ALGATFGEIGQFQFLPVNVVKYAIDADEDGKIDLVKSNIDAIASAAKFLAKLG-WTKCAGYQP----------------- 249 (288)
Q Consensus 188 ~~GS~aGa~G~~QFmPs~~~~yavD~dgdG~~dl~~~~~Da~aS~AnyL~~~G-W~~g~~~~~----------------- 249 (288)
T Consensus 161 ~~GSWAGA~GQTQFlPssy~~yaVD~DGDGr~Diw~s~pDaLAStAnyL~~~ggW~~g~~Wg~EV~lP~~~d~~~~g~~~ 240 (313)
T TIGR02283 161 LKGSWAGAMGQTQFLPSSYLKYAVDFDGDGRRDIWNSVPDALASTANYLVRGGGWKRGRPWGYEVRLPEGFDYELAGSQQ 240 (313)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEECCCCC
T ss_conf 01356765379875736555410234698844578886227899999998416865788841578716898700078855
Q ss_pred ----------------C---------------------------CHHHHHHHHHHCHHHHHHHHHHHHHHHCC
Q ss_conf ----------------5---------------------------34589999852628999999999999689
Q gi|254780308|r 250 ----------------G---------------------------EKNFAILKHWNASLNYNKTIAYIAAHIDG 279 (288)
Q Consensus 250 ----------------~---------------------------~~n~~~~~~~n~s~~y~~~v~~~a~~~~g 279 (288)
T Consensus 241 ~~~~~~W~~~Gv~~~~G~~~p~~~~~~~A~L~~P~G~~GPAFL~~~NF~~~~~wN~S~~Yal~iG~lADri~g 313 (313)
T TIGR02283 241 KKPIAEWQALGVTRADGRPLPAAEAAAEASLLLPAGRKGPAFLVTPNFRVIKEWNRSDIYALTIGLLADRIAG 313 (313)
T ss_pred CCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 4777999856821689863775000187256546789885001305799999975578999999999987139