HHsearch results for GI: 254780308 and protein with PDBid: 3fi7_A
>3fi7_A LMO1076 protein; listeria monocytogenes, autolysin, N acetylglucosaminidase, peptidoglycan hydrolase, autoinhibition, GH73; 2.35A {Undefined}
Probab=96.54 E-value=0.0016 Score=40.62 Aligned_cols=131 Identities=16% Similarity=0.216 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99853234699999998389988944523100221010256418999987532753156654789999998643877700
Q gi|254780308|r 108 IALKKANSRLLINLKKEYGVPPGILMALWGLETHFGETMGKTPLLSTLATLAYDCRRAKFFTEQFFYALDLVKKGVISSH 187 (288)
Q Consensus 108 r~~~~~~~~~L~~ie~~yGV~~~ii~AiwGiET~yG~~~G~~~vl~aLaTLA~d~RR~~ff~~el~a~l~~~~~g~~~~~ 187 (288)
++|.+++...-.++.++|||||++++|-..+||.||+. .||-.+- ..+| .
T Consensus 31 ~~fi~~~~~~a~~~~~~ygI~ps~~lAQailESGwG~S-----------~la~~~n-~NlF------------------G 80 (183)
T 3fi7_A 31 QTFINSISTQAMDLCKKYNLYPSVMIAQAALESNWGRS-----------ELGKAPN-YNLF------------------G 80 (183)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTTS-----------TTTSTTT-CCTT------------------C
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC-----------CCCCCCC-CCCC------------------C
T ss_conf 99999999999999999694989999999997479988-----------6566777-2503------------------4
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHCCCCCC----CCCCCCCHHHH--
Q ss_conf 036752357866655224442153678999878------878988899999999997298885----89764534589--
Q gi|254780308|r 188 ALGATFGEIGQFQFLPVNVVKYAIDADEDGKID------LVKSNIDAIASAAKFLAKLGWTKC----AGYQPGEKNFA-- 255 (288)
Q Consensus 188 ~~GS~aGa~G~~QFmPs~~~~yavD~dgdG~~d------l~~~~~Da~aS~AnyL~~~GW~~g----~~~~~~~~n~~-- 255 (288)
++++|.|. ..-+++ ....+|.+... -+.|..|.+..-+++|..+..-.. ..+........
T Consensus 81 ika~~~~~---~~~~~t-----~e~~~~~~~~~~~~~f~~y~s~~~sv~dy~~~L~~~~~y~~~~~~~~~~~~~~~~~~~ 152 (183)
T 3fi7_A 81 IKGSYNGK---SVTMKT-----WEYSDSKGWYQINANFAKYPSHKESLEDNAKKLRNGPSWDSSYYKGAWRENAKTYKDA 152 (183)
T ss_dssp CBSCBTTB---EEEEEE-----EEEETTTEEEEEEEEEECCSSHHHHHHHHHHHHHHCCTTCTTTTGGGSTTTCSSHHHH
T ss_pred CCCCCCCC---CCCCCC-----EEECCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
T ss_conf 31368997---557878-----3450798632322125520989999999999995596302577889998602429999
Q ss_pred -HHH--HHHCHHHHHHHHHHHHHH
Q ss_conf -999--852628999999999999
Q gi|254780308|r 256 -ILK--HWNASLNYNKTIAYIAAH 276 (288)
Q Consensus 256 -~~~--~~n~s~~y~~~v~~~a~~ 276 (288)
.+. .|-..-.|+..|..+-++
T Consensus 153 ~~l~~~gYATDp~Y~~kl~~iI~~ 176 (183)
T 3fi7_A 153 TAWLQGRYATDNTYASKLNTLISS 176 (183)
T ss_dssp HHHHBTTTBSCTTHHHHHHHHHHH
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 999977886880599999999998