HHSEARCH alignment of GI: 254780308 and SCOP domain: d1qusa_

Alignment
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=581.42  Aligned_cols=237  Identities=24%  Similarity=0.424  Sum_probs=218.8

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHCCCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999839998999998608777702333202566--------667779899987640013579999985323
Q gi|254780308|r   43 GEWKSAARARAVREGMSPKTAKHLFADLEYLDTTIARDRKMV--------TSPPVSFKDYLDGLSSSEIIAQGIALKKAN  114 (288)
Q Consensus        43 ~~wl~~l~~~A~~~Gis~~tl~~~f~~~~~~~~VI~~dr~Qp--------~ef~~t~~~Y~~~~vs~~Ri~~Gr~~~~~~  114 (288)
                      .+....+...|.++|+++++++++|++++++++||++|++|+        +++++||.+|++++|++.||++|++++++|
T Consensus        19 p~v~~Fi~~la~~~G~s~~~l~~~f~~~k~~~~vi~~~~~q~~~~~~~~p~~~~~~w~~Y~~~~v~~~ri~~g~~~~~~~   98 (322)
T d1qusa_          19 PNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQY   98 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHHHHHTTCCCCHHHHHHHHCC----------CCSCHHHHHHTTTCSHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             87999999999982989999999997284668899987614654446886013676999998857999999999999999


Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHCCCCCHHC-CCCC
Q ss_conf             46999999983899889445231002210102564189999875327-531566547899999986438777000-3675
Q gi|254780308|r  115 SRLLINLKKEYGVPPGILMALWGLETHFGETMGKTPLLSTLATLAYD-CRRAKFFTEQFFYALDLVKKGVISSHA-LGAT  192 (288)
Q Consensus       115 ~~~L~~ie~~yGV~~~ii~AiwGiET~yG~~~G~~~vl~aLaTLA~d-~RR~~ff~~el~a~l~~~~~g~~~~~~-~GS~  192 (288)
                      +++|++||++||||++||+|||||||+||+++|+++|++|||||||| +||++||++||+++|+|++++++++.. +|||
T Consensus        99 ~~~l~~~e~~yGV~~~ii~aiwgvET~yG~~~G~~~v~~aLaTLAf~~~rR~~ff~~EL~a~L~i~~~~~~~~~~l~GSw  178 (322)
T d1qusa_          99 EDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSF  178 (322)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHTTTTCCCCEEHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHTTCCGGGCEECT
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             99999999985988778777776450332432777303234556641664143430899999999874276754345674


Q ss_pred             CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC-----------------------
Q ss_conf             235786665522444215367899987887898889999999999729888589764-----------------------
Q gi|254780308|r  193 FGEIGQFQFLPVNVVKYAIDADEDGKIDLVKSNIDAIASAAKFLAKLGWTKCAGYQP-----------------------  249 (288)
Q Consensus       193 aGa~G~~QFmPs~~~~yavD~dgdG~~dl~~~~~Da~aS~AnyL~~~GW~~g~~~~~-----------------------  249 (288)
                      ||||||||||||||++|||||||||++|||++ +|||+|+||||++|||++|+||..                       
T Consensus       179 AGAmG~~QFmPSsy~~yavD~DgDG~~Diwn~-~DaiaS~ANYL~~~GW~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (322)
T d1qusa_         179 AGAMGYGQFMPSSYKQYAVDFSGDGHINLWDP-VDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGFKTKYSISQLA  257 (322)
T ss_dssp             TCCBTTTTBCHHHHHHHCCCCSSSSCCCTTSH-HHHHHHHHHHHHHTTCCTTCCSEEEEESCCTTSCCEEEEEEEHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCCCEEECCC-HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
T ss_conf             31247653044899977552379852010363-12375799999981987798568983576654645676445599998


Q ss_pred             -------------------------------CCHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
Q ss_conf             -------------------------------5345899998526289999999999996899
Q gi|254780308|r  250 -------------------------------GEKNFAILKHWNASLNYNKTIAYIAAHIDGV  280 (288)
Q Consensus       250 -------------------------------~~~n~~~~~~~n~s~~y~~~v~~~a~~~~g~  280 (288)
                                                     +.+||+||++||+|..|+++|++||++|.++
T Consensus       258 ~~Gv~~~~~~~~~~~~~~l~l~~g~~~~~~l~~~NF~vI~rYN~S~~YAlaV~~La~~I~~~  319 (322)
T d1qusa_         258 AAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALA  319 (322)
T ss_dssp             HTTCEESSCCTTCCEEEEEEEECSSSEEEEEECHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             65787677888545464475348888616997578999987318498999999999999863


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Bacterial muramidase, catalytic domain
domain: 36 kDa soluble lytic transglycosylase, SLT35
species: Escherichia coli [TaxId: 562]