HHsearch alignment for GI: 254780309 and conserved domain: TIGR00201

>TIGR00201 comF comF family protein; InterPro: IPR005222 Proteins in this family are found in bacterial species which posses systems for natural transformation with exogenous DNA (eg Bacillus subtilis, Haemophilus influenzae), and also species without these systems (eg Escherichia coli). Competence protein F has been shown to be important for the uptake of exogenous DNA in naturally competent bacteria, though the precise role of this protein is not yet known , . GntX is a periplasmic gluconate binding protein thought to be part of a high-affinity gluconate transport system ..
Probab=99.36  E-value=1.7e-13  Score=94.40  Aligned_cols=54  Identities=43%  Similarity=0.546  Sum_probs=48.6

Q ss_pred             CCCEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH-CCCCEEEEEEEEE
Q ss_conf             976088251021002897599992004573889999999997-8997899999983
Q gi|254780309|r    1 MRNAFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKK-AGAMTVSILTFSR   55 (59)
Q Consensus         1 l~gaf~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~-~ga~~V~~~~lar   55 (59)
T Consensus       153 l~n~f~l~~~~-~~~~~~~ivL~DD~~TTGatl~~~~~lLl~k~ga~~V~~~~L~r  207 (207)
T TIGR00201       153 LENAFKLKSKK-KEFQGRKIVLVDDVVTTGATLAEIAKLLLKKLGAAKVQVWSLAR  207 (207)
T ss_pred             HHHHHHHHCCC-CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCC
T ss_conf             55666542032-46887558997045101236899999998645700114412069