HHsearch alignment of GI: 254780309 and MMDB domain: 1ufr_A_11-155

>1ufr_A (A:11-155) TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus}

Probab=98.90  E-value=3.2e-09  Score=70.92  Aligned_cols=45  Identities=33%  Similarity=0.358  Sum_probs=38.0

Q ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             021002897599992004573889999999997899789999998
Q gi|254780309|r   10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .....++||+||||||+++||.|+.++++.|+++|+.++..++..
T Consensus        79 ~~~~~~~gk~VliVDDii~TG~T~~~~~~~l~~~g~~~v~~~~v~  123 (145)
T 1ufr_A           79 RIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVL  123 (145)
T ss_dssp             EECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEE
T ss_pred             CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             576665687599995244667059999999852289968999999