HHsearch alignment for GI: 254780311 and conserved domain: cd03012
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=98.24 E-value=1.2e-05 Score=50.45 Aligned_cols=114 Identities=18% Similarity=0.102 Sum_probs=75.6
Q ss_pred CCCCCC----CCCCCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEEC------CCCHHH
Q ss_conf 884036----8884023589838974999982288787410010104653112455310110234303------540113
Q gi|254780311|r 20 PDGSKA----FQWKDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSV------NDAFVM 89 (177)
Q Consensus 20 Pd~tl~----~~~~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~------~d~~~~ 89 (177)
T Consensus 1 p~~~~~~~wlN~~~~vsL~~~-kGK~Vll~FW-atwC~pC~~e-~P~l~~l~~~~~~~gv-~vigV~~~~~~~e~~~~~~ 76 (126)
T cd03012 1 PEFEGILQWLNTDKPLSLAQL-RGKVVLLDFW-TYCCINCLHT-LPYLTDLEQKYKDDGL-VVIGVHSPEFAFERDLANV 76 (126)
T ss_pred CCCCCCCCCCCCCCCCCHHHH-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCCCCCC-EEEEEECCCCCCCCCHHHH
T ss_conf 988876741269983758994-9998999872-2419378877-2999999997065881-7999844544430259999
Q ss_pred HHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEE-CCCEEEEEEECC
Q ss_conf 665223587527861036715433320022476543441001599998-799699999748
Q gi|254780311|r 90 NAWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALI-KDMVVESWFVEE 149 (177)
Q Consensus 90 ~aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii-~dG~I~~~~~E~ 149 (177)
T Consensus 77 ~~~~~~~~i~-~pv~~D~~~~~~~~~~v~------~~-----Pt~~lID~~G~i~~~~~Ge 125 (126)
T cd03012 77 KSAVLRYGIT-YPVANDNDYATWRAYGNQ------YW-----PALYLIDPTGNVRHVHFGE 125 (126)
T ss_pred HHHHHHHCCC-CEEEECCCHHHHHHCCCC------CC-----CEEEEECCCCCEEEEEECC
T ss_conf 9999985997-428985817889857998------23-----8799998998299999578