HHsearch results for GI: 254780311 and protein with PDBid: 1n8j_A
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.95 E-value=4.6e-28 Score=170.03 Aligned_cols=145 Identities=19% Similarity=0.332 Sum_probs=117.2
Q ss_pred ECCCCCCCCCCC----CCCCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
Q ss_conf 367068840368----8840235898389749999822887874100101046531124553101102343035401136
Q gi|254780311|r 15 VATVLPDGSKAF----QWKDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMN 90 (177)
Q Consensus 15 vGd~~Pd~tl~~----~~~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~ 90 (177)
||+++|+|++.. +..+++++|+ +||||||+|||++|||+|+.| ++.+.+.++.|++.++ +++.+|+|+++.+.
T Consensus 3 Ig~kaP~F~~~a~~~g~~~~vslsd~-~Gk~vVL~FyP~~ftp~C~~E-~~~~~~~~~~f~~~~~-~vvgIS~D~~~sh~ 79 (186)
T 1n8j_A 3 INTKIKPFKNQAFKNGEFIEVTEKDT-EGRWSVFFFYPADFTFVSPTE-LGDVADHYEELQKLGV-DVYSVSTDTHFTHK 79 (186)
T ss_dssp TTCBCCCCEEEEEETTEEEEEEHHHH-TTSEEEEEECSCTTCSHHHHH-HHHHHHHHHHHHHTTE-EEEEEESSCHHHHH
T ss_pred CCCCCCCCEEEEEECCEEEEEEHHHH-CCCEEEEEEEECCCCCCCHHH-HHHHHHHHHHHCCCCE-EEEEECCCCHHHHH
T ss_conf 78708998757667890579768996-999499999815789637999-9999987787416883-89864588466589
Q ss_pred HHHCCCC---CCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCCCCCHH
Q ss_conf 6522358---75278610367154333200224765434410015999987-9969999974887778777773248999
Q gi|254780311|r 91 AWGKKLE---IKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYEISSPE 166 (177)
Q Consensus 91 aw~~~~~---~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~vs~ae 166 (177)
+|.+... ...+++|+|++++++++||+..+.. | .+.|.++||| +|+|+++++..... -.+++
T Consensus 80 ~w~~~~~~~~~~~fpllsD~~~~v~k~ygv~~~~~--g---~~~r~tfiID~~G~Ir~~~~~~~~~---------~r~~~ 145 (186)
T 1n8j_A 80 AWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDE--G---LADRATFVVDPQGIIQAIEVTAEGI---------GRDAS 145 (186)
T ss_dssp HHHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEEEEECTTB---------CCCHH
T ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCC--C---CCEEEEEEECCCCEEEEEEECCCCC---------CCCHH
T ss_conf 98731320366566754237899999839975557--8---6133589999999799999838998---------98999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999998616
Q gi|254780311|r 167 NVLKVIRESK 176 (177)
Q Consensus 167 ~iL~~Lk~~~ 176 (177)
++|+.|++.|
T Consensus 146 EiLr~l~alq 155 (186)
T 1n8j_A 146 DLLRKIKAAQ 155 (186)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999853