HHsearch results for GI: 254780311 and protein with PDBid: 1zof_A
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.95 E-value=9.7e-28 Score=168.28 Aligned_cols=146 Identities=19% Similarity=0.279 Sum_probs=116.4
Q ss_pred EECCCCCCCCCCCCC------CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCH
Q ss_conf 536706884036888------40235898389749999822887874100101046531124553101102343035401
Q gi|254780311|r 14 RVATVLPDGSKAFQW------KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAF 87 (177)
Q Consensus 14 kvGd~~Pd~tl~~~~------~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~ 87 (177)
-||++||||+++.-. ..++|+|+.+++||||+|||++|||+|+.|.+ .+.+.++.|++.|+ +++.+|++..+
T Consensus 2 lVg~~APdF~l~a~~g~~~~~~~vsLsd~~gk~~vVL~FyP~dfTp~C~~E~~-~f~~~~~~f~~~g~-~vvgiS~Ds~~ 79 (198)
T 1zof_A 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEII-AFDKRVKDFHEKGF-NVIGVSIDSEQ 79 (198)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHH-HHHHTHHHHHHTTE-EEEEEESSCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCEEEEEEECCCCCCCCHHHHH-HHHHHHHHHHCCCC-EEECCCCCCHH
T ss_conf 78870898783144688854648963898599869999987656998989999-99988887522781-78424677788
Q ss_pred HHHHHHCCCC------CCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCC
Q ss_conf 1366522358------75278610367154333200224765434410015999987-9969999974887778777773
Q gi|254780311|r 88 VMNAWGKKLE------IKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPY 160 (177)
Q Consensus 88 ~~~aw~~~~~------~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~ 160 (177)
.+.+|.+... ...+++++|..++.+++||+... .++ +.|.++||+ ||+|+++++......
T Consensus 80 sh~~~~~~~~~~~g~~~~~fpll~D~~~~i~~~yGv~~~---~~~---~~R~tfiID~~G~Ir~~~~~~~~~g------- 146 (198)
T 1zof_A 80 VHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFE---EAI---ALRGAFLIDKNMKVRHAVINDLPLG------- 146 (198)
T ss_dssp HHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEET---TTE---ECEEEEEEETTTEEEEEEEESSSCC-------
T ss_pred HHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCCCC---CCC---CCCEEEEECCCCEEEEEEECCCCCC-------
T ss_conf 899997656761676687436637793289997499766---674---2324999879984999998589999-------
Q ss_pred CCCCHHHHHHHHHHHC
Q ss_conf 2489999999998616
Q gi|254780311|r 161 EISSPENVLKVIRESK 176 (177)
Q Consensus 161 ~vs~ae~iL~~Lk~~~ 176 (177)
-+++++|+.|++.|
T Consensus 147 --r~~~EvLr~l~alq 160 (198)
T 1zof_A 147 --RNADEMLRMVDALL 160 (198)
T ss_dssp --CHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHH
T ss_conf --89999999999852