HHsearch results for GI: 254780311 and protein with PDBid: 2k6v_A
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.80 E-value=1.5e-08 Score=64.93 Aligned_cols=145 Identities=17% Similarity=0.147 Sum_probs=88.6
Q ss_pred CCCCCCCCCCCCCCCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHC--CCEEEEEEC----CCCHHH
Q ss_conf 67068840368884023589838974999982288787410010104653112455310--110234303----540113
Q gi|254780311|r 16 ATVLPDGSKAFQWKDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEG--IEEVYCLSV----NDAFVM 89 (177)
Q Consensus 16 Gd~~Pd~tl~~~~~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~--~~~i~~~s~----~d~~~~ 89 (177)
+...|||+|.++.++++++| |+||++||+|.--.=..+|... ++......+.+..++ ...++.+++ |.|.++
T Consensus 13 ~~~~~dF~L~d~~G~~~l~d-~~Gk~~vl~F~yt~Cp~~Cp~~-~~~l~~~~~~l~~~~~~~v~~l~isvDP~~Dtp~~l 90 (172)
T 2k6v_A 13 NPKPVDFALEGPQGPVRLSQ-FQDKVVLLFFGFTRCPDVCPTT-LLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVA 90 (172)
T ss_dssp EEEECCCEEECSSSEEEGGG-STTSEEEEEEECTTCSSHHHHH-HHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHH
T ss_pred CCCCCCEEEECCCCCEEHHH-HCCCEEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH
T ss_conf 99789838987999895699-6998899999888899858799-999998876533313664589970488354617799
Q ss_pred HHHHCCCCCCEEEEEE-C--CCHHHHHHHHCCCCCCC---CCCCEEE-EEEEEEECCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 6652235875278610-3--67154333200224765---4344100-15999987996999997488777877777324
Q gi|254780311|r 90 NAWGKKLEIKNVKLLP-D--GSGEFTRKMGMLVYKDN---VGFGLRS-WRYGALIKDMVVESWFVEEGFSDNCATDPYEI 162 (177)
Q Consensus 90 ~aw~~~~~~~~~~~l~-D--~~~~~~~~~g~~~~~~~---~g~g~rs-~R~a~Ii~dG~I~~~~~E~~~~~~~~~d~~~v 162 (177)
++|.+..+.. +.++. | ....+++++|+...... .+.+.-. ....+|+++|.+...+.- ...
T Consensus 91 ~~y~~~~~~~-~~~ltg~~~~i~~v~~~~gv~~~~~~~~~~~~y~i~Hs~~~~Lid~G~~~~~~~~-----------~~~ 158 (172)
T 2k6v_A 91 DRYAKAFHPS-FLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSP-----------DKA 158 (172)
T ss_dssp HHHHHHHCTT-EEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECH-----------HHH
T ss_pred HHHHHHCCCC-CCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEEECCEEEEEECCCCEEEEECC-----------CCC
T ss_conf 9988761887-4565599999999999729479834678999745866346999859939999868-----------988
Q ss_pred CCHHHHHHHHHH
Q ss_conf 899999999986
Q gi|254780311|r 163 SSPENVLKVIRE 174 (177)
Q Consensus 163 s~ae~iL~~Lk~ 174 (177)
.++|.|++.|+.
T Consensus 159 ~~~~~i~~dl~~ 170 (172)
T 2k6v_A 159 EATDRVVADLQA 170 (172)
T ss_dssp TCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
T ss_conf 689999999998