HHsearch results for GI: 254780311 and protein with PDBid: 3eur_A
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein structure initiative; HET: MSE; 1.30A {Bacteroides fragilis nctc 9343}
Probab=99.18 E-value=1.1e-10 Score=76.48 Aligned_cols=132 Identities=12% Similarity=0.049 Sum_probs=82.6
Q ss_pred EEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHH---HHHHHHHCCCEEEEEECCCC-H
Q ss_conf 9536706884036888-40235898389749999822887874100101046531---12455310110234303540-1
Q gi|254780311|r 13 MRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKI---YDDLRCEGIEEVYCLSVNDA-F 87 (177)
Q Consensus 13 ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~---~~~~~~~~~~~i~~~s~~d~-~ 87 (177)
.+||+++|||++.+.+ +.+++++ ++||++||+|++ ...|.|..+ .|...+. ++.....++ .+++++.++. -
T Consensus 5 ~~iG~~apdf~l~~~~G~~~~l~~-~~gk~vvl~f~~-~~C~~C~~~-~~~l~~~~~~~~~~~~~~v-~vi~is~d~~~~ 80 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGVKGTLYQ-FPAEYTLLFINN-PGCHACAEM-IEGLKASPVINGFTAAKKL-KVLSIYPDEELD 80 (142)
T ss_dssp TCTTSBCCCCEEEETTSCEEETTT-CCCSEEEEEECC-SSSHHHHHH-HHHHHHCHHHHHHHHTTSE-EEEEEECSSCHH
T ss_pred CCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEEEC-CCCCCCCEE-EHHHHHHHHHHHHHHCCCE-EEEEECCCCCHH
T ss_conf 479899979486989979987899-399829999826-789976323-0216877765555414884-898764899999
Q ss_pred HHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCCCCCHH
Q ss_conf 136652235875278610367154333200224765434410015999987-9969999974887778777773248999
Q gi|254780311|r 88 VMNAWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYEISSPE 166 (177)
Q Consensus 88 ~~~aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~vs~ae 166 (177)
....|.+..+.. ...+.|+.+...... .+|..+.++.+|++ ||+|.... .+++
T Consensus 81 ~~~~~~~~~~~~-~~~~~d~~~~~~~~~---------~~~i~~~P~~~liD~~G~Iv~~~----------------~~~~ 134 (142)
T 3eur_A 81 EWKKHRNDFAKE-WTNGYDKELVIKNKN---------LYDLRAIPTLYLLDKNKTVLLKD----------------ATLQ 134 (142)
T ss_dssp HHHHHGGGSCTT-SEEEECTTCHHHHTT---------CSCCTTCSEEEEECTTCBEEEEE----------------ECHH
T ss_pred HHHHHHHHCCCC-CCEECCCCCCHHHHH---------HCCCCCCCEEEEECCCCEEEEEE----------------CCHH
T ss_conf 999999984998-631327431134555---------40136777899998998899963----------------9999
Q ss_pred HHHHHHHH
Q ss_conf 99999986
Q gi|254780311|r 167 NVLKVIRE 174 (177)
Q Consensus 167 ~iL~~Lk~ 174 (177)
.+-++|++
T Consensus 135 ~i~~~L~e 142 (142)
T 3eur_A 135 KVEQYLAE 142 (142)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHCC
T ss_conf 99998639