HHsearch results for GI: 254780311 and protein with PDBid: 3ia1_A

>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.76A {Thermus thermophilus HB27}
Probab=98.98  E-value=1.7e-09  Score=70.02  Aligned_cols=119  Identities=17%  Similarity=0.301  Sum_probs=72.7

Q ss_pred             EEEEEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEEC---C
Q ss_conf             59999536706884036888-4023589838974999982288787410010104653112455310110234303---5
Q gi|254780311|r    9 VVFHMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSV---N   84 (177)
Q Consensus         9 ~~~~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~---~   84 (177)
                      ++|.+++|+.+|+|++.+.+ +.+++++ + +|++||.|+ +.+-|.|..+ +|...+.++.   .+.. ++.++.   +
T Consensus         1 ~~~~v~~G~~aP~f~l~d~~G~~v~l~~-~-~k~~vl~F~-atwC~~C~~~-~p~l~~l~~~---~~~~-~~~v~~~~~~   72 (154)
T 3ia1_A            1 MSLAVKPGEPLPDFLLLDPKGQPVTPAT-V-SKPAVIVFW-ASWCTVCKAE-FPGLHRVAEE---TGVP-FYVISREPRD   72 (154)
T ss_dssp             ---CCCSBEECCCCCEECTTSCEECTTT-S-CSSEEEEEE-CTTCHHHHHH-HHHHHHHHHH---HCCC-EEEEECCTTC
T ss_pred             CCCCCCCCCCCCCEEEECCCCCEECHHH-C-CCCEEEEEE-CCCCCCHHHH-HHHHHHHHCC---CCCE-EEEEEEECCH
T ss_conf             9866899698888488889989971899-6-998999998-6888546999-9987621125---6743-7899864126


Q ss_pred             CCHHHHHHHCCCCCCEEEEEE---CCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEE-CCCEEEEEEE
Q ss_conf             401136652235875278610---36715433320022476543441001599998-7996999997
Q gi|254780311|r   85 DAFVMNAWGKKLEIKNVKLLP---DGSGEFTRKMGMLVYKDNVGFGLRSWRYGALI-KDMVVESWFV  147 (177)
Q Consensus        85 d~~~~~aw~~~~~~~~~~~l~---D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii-~dG~I~~~~~  147 (177)
                      ++.....|.+..+.. ++.+.   |..+.+.+.+++.           +--+++|+ .+|+|.+.+.
T Consensus        73 ~~~~~~~~~~~~~~~-~p~~~~~~d~~~~~~~~~~v~-----------~~P~~~iiD~~G~I~~~~~  127 (154)
T 3ia1_A           73 TREVVLEYMKTYPRF-IPLLASDRDRPHEVAARFKVL-----------GQPWTFVVDREGKVVALFA  127 (154)
T ss_dssp             CHHHHHHHHTTCTTE-EECBCCSSCCHHHHHTTSSBC-----------SSCEEEEECTTSEEEEEEE
T ss_pred             HHHHHHHHHHHCCCC-CCEEEECCCCCCHHHHHCCCC-----------CCCEEEEECCCCEEEEEEE
T ss_conf             799999999980999-627861468532589985988-----------0688999989998999995