HHsearch alignment for GI: 254780312 and conserved domain: COG0784
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms].
Probab=99.82 E-value=1.3e-18 Score=132.53 Aligned_cols=119 Identities=36% Similarity=0.567 Sum_probs=107.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHH-HHHHHHHHC-CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 86699975998999999999998898999999979-999999718-9989999836559997999999998589985999
Q gi|254780312|r 2 NQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGA-SAYDKVREE-PFSLLLTDIVMPEMDGIELARRATELDPDLKVMF 79 (122)
Q Consensus 2 ~~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~-~al~~~~~~-~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~ 79 (122)
T Consensus 5 ~~~vLivdD~~~~~~~~~~~l~~~g~~v~~a~~~~~~al~~~~~~~~~dlii~D~~mp~~~G~~~~~~l~~~~~~~pvv~ 84 (130)
T COG0784 5 GLRVLVVDDEPVNRRLLKRLLEDLGYEVVEAADGEEEALELLRELPQPDLILLDINMPGMDGIELLRRLRARGPNIPVIL 84 (130)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf 88899978999999999999987797899957839999999862789999998068878888999999997189996899
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHH-HHHHHHHHHHC
Q ss_conf 943797899999997699869976979899-99999999603
Q gi|254780312|r 80 ITGFAAVALNPDSNAPKNAKVLSKPFHLRD-LVNEVNRLLTI 120 (122)
Q Consensus 80 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~-L~~~i~~~l~~ 120 (122)
T Consensus 85 ~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~ 126 (130)
T COG0784 85 LTAYADEADRERALAAGADDYLTKPIFLEEELLAALRRLLAR 126 (130)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 986786765999997687689758998799999999999864