HHsearch alignment for GI: 254780312 and conserved domain: COG4753
>COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].
Probab=99.94 E-value=2.8e-26 Score=178.44 Aligned_cols=117 Identities=26% Similarity=0.460 Sum_probs=111.0
Q ss_pred CEEEEECCCHHHHHHHHHHH--HHCCCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 66999759989999999999--98898999-9999799999997189989999836559997999999998589985999
Q gi|254780312|r 3 QKILLAEDDDDMRRFLIKAL--GKAGYEVV-SCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMF 79 (122)
Q Consensus 3 ~rILiVDD~~~~r~~l~~~L--~~~G~~v~-~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~ 79 (122)
T Consensus 2 ykVlIVDDE~lIr~GLk~lI~w~~~g~eiVgtA~NG~eAleli~e~~pDiviTDI~MP~mdGLdLI~~ike~~p~~~~II 81 (475)
T COG4753 2 YKVLIVDDEPLIREGLKSLIDWEALGIEVVGTAANGKEALELIQETQPDIVITDINMPGMDGLDLIKAIKEQSPDTEFII 81 (475)
T ss_pred EEEEEECCHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 13999667299999999848856369757875145799999987349978998157888757999999997499853999
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 9437978999999976998699769798999999999960
Q gi|254780312|r 80 ITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLT 119 (122)
Q Consensus 80 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~ 119 (122)
T Consensus 82 LSGy~eFeYak~Am~lGV~dYLLKP~~k~eL~~~L~ki~~ 121 (475)
T COG4753 82 LSGYDEFEYAKKAMKLGVKDYLLKPVDKAELEEALKKIIG 121 (475)
T ss_pred EECCCHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHH
T ss_conf 8464205899999861852122076989999999999999