HHsearch alignment for GI: 254780312 and conserved domain: PRK10403

>PRK10403 transcriptional regulator NarP; Provisional.
Probab=99.88  E-value=2.2e-21  Score=149.19  Aligned_cols=118  Identities=21%  Similarity=0.198  Sum_probs=111.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHH-CCCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             6699975998999999999998-898999-99997999999971899899998365599979999999985899859999
Q gi|254780312|r    3 QKILLAEDDDDMRRFLIKALGK-AGYEVV-SCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFI   80 (122)
Q Consensus         3 ~rILiVDD~~~~r~~l~~~L~~-~G~~v~-~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~   80 (122)
T Consensus         7 irIlIvDD~~l~r~gl~~~L~~~~~~~vv~~a~~~~~~~~~~~~~~pDlvllD~~lp~~~G~~~~~~l~~~~p~~~iivl   86 (215)
T PRK10403          7 FQVLIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIIL   86 (215)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEE
T ss_conf             57999839899999999999758992899998999999999864499899980899899874123356541887736886


Q ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             4379789999999769986997697989999999999603
Q gi|254780312|r   81 TGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI  120 (122)
Q Consensus        81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~  120 (122)
T Consensus        87 t~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G  126 (215)
T PRK10403         87 TVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIRAGAKG  126 (215)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf             3243236789987468766884899999999999999849