HHsearch alignment for GI: 254780312 and conserved domain: PRK11466

>PRK11466 hybrid sensory histidine kinase TorS; Provisional.
Probab=99.96  E-value=1e-27  Score=187.09  Aligned_cols=119  Identities=25%  Similarity=0.402  Sum_probs=113.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             669997599899999999999889899999997999999971-8998999983655999799999999858998599994
Q gi|254780312|r    3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVRE-EPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFIT   81 (122)
Q Consensus         3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~-~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s   81 (122)
T Consensus       682 lrVLvVEDn~~N~~v~~~~L~~lG~~v~~A~nG~eAle~l~~~~~fDlVLmDi~MP~mDG~eatr~iR~~~~~~pIIAlT  761 (912)
T PRK11466        682 LRLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDYDGITLARQLAQQYPSLVLIGFS  761 (912)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEC
T ss_conf             86999948788999999999986998999899999999997189985898769999998999999998619999789977


Q ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf             3797899999997699869976979899999999996036
Q gi|254780312|r   82 GFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTIK  121 (122)
Q Consensus        82 ~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~~  121 (122)
T Consensus       762 A~a~~ed~~~~l~aGmd~~L~KPv~~~~L~~~l~~~l~~~  801 (912)
T PRK11466        762 AHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQ  801 (912)
T ss_pred             CCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCC
T ss_conf             9878899999997699877549899999999999984667