HHsearch alignment for GI: 254780312 and conserved domain: PRK12555

Probab=99.90  E-value=2.1e-22  Score=155.22  Aligned_cols=113  Identities=19%  Similarity=0.396  Sum_probs=98.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             6999759989999999999988-98999-999979999999718998999983655999799999999858998599994
Q gi|254780312|r    4 KILLAEDDDDMRRFLIKALGKA-GYEVV-SCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFIT   81 (122)
Q Consensus         4 rILiVDD~~~~r~~l~~~L~~~-G~~v~-~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s   81 (122)
T Consensus         3 rVLIVDDs~~~R~~l~~~L~~~~~~eVv~~A~~g~eAl~~~~~~~pDvVllDi~MP~mdGie~l~~I~~~~p-~PVimvS   81 (340)
T PRK12555          3 NVGIVDDSALAREALRRIIARRPDHRVLGVATDGLQARDLCKAQPPDVVLLDLEMPRMDGLTFLRRIMRRRP-CPVLIVS   81 (340)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC-CCEEEEE
T ss_conf             899990988999999999960999489999899999999988619999997278899987999999998789-9869985


Q ss_pred             CCCCH--HHHHHHHHCCCCEEEECCCC---------HHHHHHHHHHH
Q ss_conf             37978--99999997699869976979---------89999999999
Q gi|254780312|r   82 GFAAV--ALNPDSNAPKNAKVLSKPFH---------LRDLVNEVNRL  117 (122)
Q Consensus        82 ~~~~~--~~~~~~~~~g~~~~l~KP~~---------~~~L~~~i~~~  117 (122)
T Consensus        82 s~~~~~~~~~~~AL~~GA~D~i~KP~~~~~~~~~~~~~~L~~ki~~~  128 (340)
T PRK12555         82 SLTEAGASITYEALGAGALDAVDKPKLGIGRGLDAYAQELLAKIDQA  128 (340)
T ss_pred             ECCCCCHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             03565769999999779776684788775531999999999999998