HHsearch alignment for GI: 254780312 and conserved domain: PRK13837
>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=99.89 E-value=1.1e-21 Score=150.87 Aligned_cols=117 Identities=23% Similarity=0.297 Sum_probs=109.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 6699975998999999999998898999999979999999718--99899998365599979999999985899859999
Q gi|254780312|r 3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREE--PFSLLLTDIVMPEMDGIELARRATELDPDLKVMFI 80 (122)
Q Consensus 3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~--~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~ 80 (122)
T Consensus 700 e~ILvVdDe~~vr~~~~~~L~~lGY~v~~a~~~~~Al~~~~~~~~~~DLvltD-~~p~~~g~~~~~~l~~~~p~lpVi-l 777 (831)
T PRK13837 700 ETVLLVEPDDALLERYEEKLAALGYEPVGFSTLSAAIAWISKDGKRFDLVLVD-QPSLGDSQLAIAALHAAAPTLPII-L 777 (831)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEC-CCCCCCHHHHHHHHHHHCCCCEEE-E
T ss_conf 77999859889999999999967996888689999999998389985399988-999998799999998618997499-9
Q ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 43797899999997699869976979899999999996036
Q gi|254780312|r 81 TGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTIK 121 (122)
Q Consensus 81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~~ 121 (122)
T Consensus 778 sg~~~~~~~~~~~~~~~~~fL~KPfs~~~LA~avR~aL~~~ 818 (831)
T PRK13837 778 AGSSLKMAAREALATAIAEILPKPISSRTLAYALRTALATA 818 (831)
T ss_pred ECCCCHHHHHCHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 76881443311022266706509999999999999998488