HHsearch alignment for GI: 254780312 and conserved domain: TIGR01387
>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region. This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members are encoded by genes adjacent to genes which code for a member of the heavy metal sensor histidine kinase family (IPR006290 from INTERPRO), its partner in the two-component response regulator system. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=99.96 E-value=9.6e-30 Score=199.21 Aligned_cols=117 Identities=26% Similarity=0.462 Sum_probs=114.5
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 99975998999999999998898999999979999999718998999983655999799999999858998599994379
Q gi|254780312|r 5 ILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITGFA 84 (122)
Q Consensus 5 ILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s~~~ 84 (122)
T Consensus 1 iLvvEDeqkT~~YlqqGLsE~GYvvD~~~nG~DGL~lA~~~~Y~liILDvmLPG~DGW~vl~~LR~~~~~~PVl~LTA~D 80 (219)
T TIGR01387 1 ILVVEDEQKTAEYLQQGLSESGYVVDIASNGRDGLHLAEKDDYDLIILDVMLPGMDGWQVLKALRRSGKETPVLFLTARD 80 (219)
T ss_pred CEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 96763086026765305201234798877686247543688830899632588950689999984078987348883378
Q ss_pred CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 7899999997699869976979899999999996036
Q gi|254780312|r 85 AVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTIK 121 (122)
Q Consensus 85 ~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~~ 121 (122)
T Consensus 81 ~v~DkvkGLd~GAdDYLvKPF~F~ELlARvR~~LR~~ 117 (219)
T TIGR01387 81 SVADKVKGLDLGADDYLVKPFEFAELLARVRTLLRRS 117 (219)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8454353011478654137877603799999876775