HHsearch alignment for GI: 254780312 and conserved domain: pfam00072
>pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
Probab=99.96 E-value=7.7e-29 Score=193.82 Aligned_cols=111 Identities=32% Similarity=0.520 Sum_probs=108.6
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 99975998999999999998898999999979999999718998999983655999799999999858998599994379
Q gi|254780312|r 5 ILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITGFA 84 (122)
Q Consensus 5 ILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s~~~ 84 (122)
T Consensus 1 ILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~~al~~~~~~~~dlvi~Di~mP~~dG~el~~~ir~~~~~~piI~~T~~~ 80 (111)
T pfam00072 1 VLIVDDDPLIRELLRQLLEKEGYVVAEADDGEEALELLKEKRPDLILLDIRMPGMDGLELLRRIRRRPPTTPVIVLTAHG 80 (111)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 09998989999999999998899999989999999999847998999953689950157999997359998099997508
Q ss_pred CHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf 7899999997699869976979899999999
Q gi|254780312|r 85 AVALNPDSNAPKNAKVLSKPFHLRDLVNEVN 115 (122)
Q Consensus 85 ~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~ 115 (122)
T Consensus 81 ~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~ir 111 (111)
T pfam00072 81 DEEDAVEALKAGANDFLSKPFDPEELVAALR 111 (111)
T ss_pred CHHHHHHHHHCCCCEEEECCCCHHHHHHHCC
T ss_conf 9999999997798779949999899998529