HHsearch alignment for GI: 254780312 and conserved domain: smart00448

>smart00448 REC cheY-homologous receiver domain. CheY regulates the clockwise rotation of E. coli flagellar motors. This domain contains a phosphoacceptor site that is phosphorylated by histidine kinase homologues.
Probab=99.13  E-value=3.1e-10  Score=82.35  Aligned_cols=54  Identities=39%  Similarity=0.663  Sum_probs=53.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf             699975998999999999998898999999979999999718998999983655
Q gi|254780312|r    4 KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMP   57 (122)
Q Consensus         4 rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP   57 (122)
T Consensus         2 kVLivdD~~~~~~~l~~~l~~~g~~v~~~~~g~~~~~~~~~~~~dlil~D~~mP   55 (55)
T smart00448        2 RILVVDDDPLLRELLKALLEREGYEVDEATDGEEALELLKEEKPDLILLDIMMP   55 (55)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             899993799999999999997899999988999999999749999999967687