RPSBLAST alignment of GI: 254780312 and protein with PDBid: 2pln

>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A Length = 137
 Score = 52.1 bits (124), Expect = 4e-08
 Identities = 15/116 (12%), Positives = 40/116 (34%), Gaps = 5/116 (4%)

Query: 4   KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIE 63
           ++LL E +  +   + K L   G+      +       +    + L    +++ + + + 
Sbjct: 20  RVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDL----VMVSDKNALS 75

Query: 64  LARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFH-LRDLVNEVNRLL 118
              R  E    + V+  +          +        ++KP+  ++ LV  +   L
Sbjct: 76  FVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARL 131