RPSBLAST alignment of GI: 254780312 and protein with PDBid: 2qsj

>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} Length = 154
 Score = 81.6 bits (201), Expect = 4e-17
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 3/118 (2%)

Query: 4   KILLAEDDDDMRRFLIKALGKA--GYEVVSCNNGASAYDKV-REEPFSLLLTDIVMPEMD 60
            +L+ +D   +R      L  A  G  V      + A   +  +    L+L D+ +P+ +
Sbjct: 5   VVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAE 64

Query: 61  GIELARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLL 118
            I+   R    DP   V  I+G     L   +        + K    + L++ V+ +L
Sbjct: 65  AIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLIL 122