RPSBLAST alignment of GI: 254780312 and protein with PDBid: 2qsj
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} Length = 154
Score = 81.6 bits (201), Expect = 4e-17
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 3/118 (2%)
Query: 4 KILLAEDDDDMRRFLIKALGKA--GYEVVSCNNGASAYDKV-REEPFSLLLTDIVMPEMD 60
+L+ +D +R L A G V + A + + L+L D+ +P+ +
Sbjct: 5 VVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAE 64
Query: 61 GIELARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLL 118
I+ R DP V I+G L + + K + L++ V+ +L
Sbjct: 65 AIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLIL 122